RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-208ENST00000590485 AEBP2Q6ZN18 517 aaPredicted RBP24.06■■□□□ 1.44
SAFB-208ENST00000590485 CHIC1Q5VXU3 224 aa22.35■■□□□ 1.17
SAFB-208ENST00000590485 SENP3Q9H4L4 574 aaPredicted RBP20.52■□□□□ 0.88
SAFB-208ENST00000590485 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
SAFB-208ENST00000590485 FOXD1Q16676 465 aa19.25■□□□□ 0.67
SAFB-208ENST00000590485 POTEDQ86YR6 584 aa18.8■□□□□ 0.6
SAFB-208ENST00000590485 MSH5O43196 834 aa18.17■□□□□ 0.5
SAFB-208ENST00000590485 PIAS4Q8N2W9 510 aaPredicted RBP17.8■□□□□ 0.44
SAFB-208ENST00000590485 PPP6R1Q9UPN7 881 aa17.57■□□□□ 0.4
SAFB-208ENST00000590485 ADRA2BP18089 450 aa17.44■□□□□ 0.38
SAFB-208ENST00000590485 PLPPR3Q6T4P5 718 aa17.44■□□□□ 0.38
SAFB-208ENST00000590485 DMRT2Q9Y5R5 561 aa16.22■□□□□ 0.19
SAFB-208ENST00000590485 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
SAFB-208ENST00000590485 CACNB1Q02641 598 aaPredicted RBP15.93■□□□□ 0.14
SAFB-208ENST00000590485 SCAF1Q9H7N4 1312 aaKnown RBP15.85■□□□□ 0.13
SAFB-208ENST00000590485 RNF39Q9H2S5 420 aa15.51■□□□□ 0.07
SAFB-208ENST00000590485 DCAF8L1A6NGE4 600 aa15.48■□□□□ 0.07
SAFB-208ENST00000590485 HOXD11P31277 338 aaPredicted RBP15.39■□□□□ 0.05
SAFB-208ENST00000590485 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
SAFB-208ENST00000590485 C1QBPQ07021 282 aaKnown RBP15.19■□□□□ 0.02
SAFB-208ENST00000590485 RNF216Q9NWF9 866 aaPredicted RBP15.09■□□□□ 0.01
SAFB-208ENST00000590485 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
SAFB-208ENST00000590485 KCNA4P22459 653 aa14.97□□□□□ -0.01
SAFB-208ENST00000590485 DNAJC5BQ9UF47 199 aa14.96□□□□□ -0.01
SAFB-208ENST00000590485 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
SAFB-208ENST00000590485 POTEHQ6S545 545 aa14.59□□□□□ -0.07
SAFB-208ENST00000590485 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.088e-9■■■□□ 15.8
SAFB-208ENST00000590485 NPM3O75607 178 aaKnown RBP14.53□□□□□ -0.08
SAFB-208ENST00000590485 SLC4A1APQ9BWU0 796 aaKnown RBP14.36□□□□□ -0.11
SAFB-208ENST00000590485 DSG3P32926 999 aa14.32□□□□□ -0.12
SAFB-208ENST00000590485 U3KPZ7 1027 aaPredicted RBP14.31□□□□□ -0.12
SAFB-208ENST00000590485 SPINK5Q9NQ38 1064 aaPredicted RBP14.27□□□□□ -0.13
SAFB-208ENST00000590485 EHMT2Q96KQ7 1210 aa14.22□□□□□ -0.13
SAFB-208ENST00000590485 CAPN15O75808 1086 aa14.19□□□□□ -0.14
SAFB-208ENST00000590485 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
SAFB-208ENST00000590485 ABCB7O75027 752 aa13.86□□□□□ -0.19
SAFB-208ENST00000590485 SLC4A2P04920 1241 aa13.83□□□□□ -0.2
SAFB-208ENST00000590485 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.2
SAFB-208ENST00000590485 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
SAFB-208ENST00000590485 ZBTB22O15209 634 aa13.76□□□□□ -0.21
SAFB-208ENST00000590485 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
SAFB-208ENST00000590485 APLP2Q06481 763 aa13.69□□□□□ -0.22
SAFB-208ENST00000590485 RBM42Q9BTD8 480 aaKnown RBP13.6□□□□□ -0.23
SAFB-208ENST00000590485 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
SAFB-208ENST00000590485 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
SAFB-208ENST00000590485 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
SAFB-208ENST00000590485 SAMD1Q6SPF0 538 aaPredicted RBP13.5□□□□□ -0.25
SAFB-208ENST00000590485 MYCNP04198 464 aaPredicted RBP13.47□□□□□ -0.25
SAFB-208ENST00000590485 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
SAFB-208ENST00000590485 POLA2Q14181 598 aa13.34□□□□□ -0.27
SAFB-208ENST00000590485 ATXN8OSP0DMR3 200 aa13.27□□□□□ -0.29
SAFB-208ENST00000590485 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
SAFB-208ENST00000590485 PIP4P2Q8N4L2 257 aa13.16□□□□□ -0.3
SAFB-208ENST00000590485 REM2Q8IYK8 340 aaPredicted RBP13.09□□□□□ -0.31
SAFB-208ENST00000590485 HAX1O00165 279 aa13.01□□□□□ -0.33
SAFB-208ENST00000590485 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
SAFB-208ENST00000590485 PITPNM1O00562 1244 aa12.99□□□□□ -0.33
SAFB-208ENST00000590485 FXR2P51116 673 aaKnown RBP eCLIP12.99□□□□□ -0.33
SAFB-208ENST00000590485 OSCARQ8IYS5 282 aa12.99□□□□□ -0.33
SAFB-208ENST00000590485 ZBTB12Q9Y330 459 aaPredicted RBP12.98□□□□□ -0.33
SAFB-208ENST00000590485 EVX2Q03828 476 aa12.91□□□□□ -0.34
SAFB-208ENST00000590485 PRKAR2AP13861 404 aaKnown RBP12.6□□□□□ -0.39
SAFB-208ENST00000590485 C19orf67A6NJJ6 358 aa12.59□□□□□ -0.39
SAFB-208ENST00000590485 FKBP8Q14318 412 aa12.59□□□□□ -0.39
SAFB-208ENST00000590485 SPDYE2BA6NHP3 402 aa12.57□□□□□ -0.4
SAFB-208ENST00000590485 SPDYE6P0CI01 402 aa12.57□□□□□ -0.4
SAFB-208ENST00000590485 FBLN2P98095 1184 aa12.57□□□□□ -0.4
SAFB-208ENST00000590485 SPDYE2Q495Y8 402 aa12.57□□□□□ -0.4
SAFB-208ENST00000590485 GABBR2O75899 941 aa12.53□□□□□ -0.4
SAFB-208ENST00000590485 LHX8Q68G74 356 aa12.53□□□□□ -0.4
SAFB-208ENST00000590485 SPDYE1Q8NFV5 336 aaPredicted RBP12.47□□□□□ -0.41
SAFB-208ENST00000590485 CLEC11AQ9Y240 323 aa12.47□□□□□ -0.41
SAFB-208ENST00000590485 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.41
SAFB-208ENST00000590485 SSUH2Q9Y2M2 353 aa12.4□□□□□ -0.42
SAFB-208ENST00000590485 SPDYE4A6NLX3 237 aa12.36□□□□□ -0.43
SAFB-208ENST00000590485 CHADLQ6NUI6 762 aa12.36□□□□□ -0.43
SAFB-208ENST00000590485 POTEIP0CG38 1075 aa12.33□□□□□ -0.44
SAFB-208ENST00000590485 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
SAFB-208ENST00000590485 PLSCR2Q9NRY7 297 aa12.19□□□□□ -0.46
SAFB-208ENST00000590485 PRR29P0C7W0 189 aa12.17□□□□□ -0.46
SAFB-208ENST00000590485 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
SAFB-208ENST00000590485 PROM2Q8N271 834 aa12.14□□□□□ -0.47
SAFB-208ENST00000590485 PABPN1Q86U42 306 aaKnown RBP eCLIP12.13□□□□□ -0.47
SAFB-208ENST00000590485 FBXO3Q9UK99 471 aa12.12□□□□□ -0.47
SAFB-208ENST00000590485 FARP1Q9Y4F1 1045 aaPredicted RBP12.1□□□□□ -0.47
SAFB-208ENST00000590485 CLCN6P51797 869 aa12.05□□□□□ -0.48
SAFB-208ENST00000590485 DCBLD2Q96PD2 775 aa12□□□□□ -0.49
SAFB-208ENST00000590485 ZNF579Q8NAF0 562 aaKnown RBP11.99□□□□□ -0.49
SAFB-208ENST00000590485 OTUD5Q96G74 571 aa11.95□□□□□ -0.5
SAFB-208ENST00000590485 VASPP50552 380 aaPredicted RBP11.92□□□□□ -0.5
SAFB-208ENST00000590485 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
SAFB-208ENST00000590485 AMER1Q5JTC6 1135 aaPredicted RBP11.91□□□□□ -0.5
SAFB-208ENST00000590485 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
SAFB-208ENST00000590485 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
SAFB-208ENST00000590485 STAG3Q9UJ98 1225 aa11.87□□□□□ -0.51
SAFB-208ENST00000590485 POTEMA6NI47 508 aa11.84□□□□□ -0.51
SAFB-208ENST00000590485 RTN4Q9NQC3 1192 aaKnown RBP11.82□□□□□ -0.52
SAFB-208ENST00000590485 CREBZFQ9NS37 354 aa11.82□□□□□ -0.52
SAFB-208ENST00000590485 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
SAFB-208ENST00000590485 PELP1Q8IZL8 1130 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms