Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 AC005618.3-201ENST00000624928 458 ntBASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 AL645728.2-202ENST00000641679 227 ntBASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 CTSL-202ENST00000342020 933 ntTSL 2 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRUNE2Q8WUY3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 AC025262.2-201ENST00000623975 1056 ntBASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 AC233280.19-201ENST00000633223 136 ntBASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 AL592424.1-201ENST00000563624 1536 ntBASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 OR2K2-202ENST00000374428 1038 ntBASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 PTPN20CP-201ENST00000614090 920 ntBASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 AL359258.3-201ENST00000622910 2331 ntBASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 AL157791.1-201ENST00000553667 1699 ntBASIC16.12■□□□□ 0.17
PRUNE2Q8WUY3 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 RPL18AP3-201ENST00000462885 528 ntBASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 MIR4683-201ENST00000579659 81 ntBASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 AC005324.6-201ENST00000587972 613 ntBASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRUNE2Q8WUY3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms