Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINS1Q8NG48 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LINS1Q8NG48 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.64■□□□□ 0.74
LINS1Q8NG48 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
LINS1Q8NG48 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINS1Q8NG48 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LINS1Q8NG48 ACTG1P3-201ENST00000431775 1114 ntBASIC19.64■□□□□ 0.73
LINS1Q8NG48 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 AC015936.2-201ENST00000593177 259 ntBASIC19.64■□□□□ 0.73
LINS1Q8NG48 AC008735.3-201ENST00000596646 500 ntBASIC19.64■□□□□ 0.73
LINS1Q8NG48 AC107373.2-201ENST00000607735 490 ntBASIC19.64■□□□□ 0.73
LINS1Q8NG48 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINS1Q8NG48 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LINS1Q8NG48 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINS1Q8NG48 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINS1Q8NG48 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINS1Q8NG48 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINS1Q8NG48 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINS1Q8NG48 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LINS1Q8NG48 AC092127.1-201ENST00000567093 3455 ntBASIC19.64■□□□□ 0.73
LINS1Q8NG48 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINS1Q8NG48 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 OR8S1-201ENST00000310194 1080 ntBASIC19.63■□□□□ 0.73
LINS1Q8NG48 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 AC079776.1-201ENST00000401540 1152 ntBASIC19.63■□□□□ 0.73
LINS1Q8NG48 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 MIR5189-201ENST00000577370 114 ntBASIC19.63■□□□□ 0.73
LINS1Q8NG48 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 AC093813.1-201ENST00000605066 256 ntBASIC19.63■□□□□ 0.73
LINS1Q8NG48 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC19.63■□□□□ 0.73
LINS1Q8NG48 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINS1Q8NG48 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 USP32P1-208ENST00000506594 1164 ntBASIC19.62■□□□□ 0.73
LINS1Q8NG48 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 CLUHP6-201ENST00000580789 941 ntBASIC19.62■□□□□ 0.73
LINS1Q8NG48 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 CICP13-201ENST00000422015 2789 ntBASIC19.62■□□□□ 0.73
LINS1Q8NG48 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LINS1Q8NG48 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINS1Q8NG48 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms