Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.81■□□□□ 0.28
RNF135Q8IUD6 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 GPAA1P2-202ENST00000606848 1787 ntBASIC16.8■□□□□ 0.28
RNF135Q8IUD6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 AC024267.1-201ENST00000582320 895 ntBASIC16.8■□□□□ 0.28
RNF135Q8IUD6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.8■□□□□ 0.28
RNF135Q8IUD6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF135Q8IUD6 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 ZNF767P-206ENST00000513792 565 ntBASIC16.79■□□□□ 0.28
RNF135Q8IUD6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF135Q8IUD6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms