Protein–RNA interactions for Protein: P49682

CXCR3, C-X-C chemokine receptor type 3, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR3P49682 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR3P49682 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR3P49682 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR3P49682 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR3P49682 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.35■□□□□ 0.21
CXCR3P49682 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.35■□□□□ 0.21
CXCR3P49682 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.35■□□□□ 0.21
CXCR3P49682 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CXCR3P49682 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.35■□□□□ 0.21
CXCR3P49682 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 AC105250.1-201ENST00000509378 2057 ntBASIC16.34■□□□□ 0.21
CXCR3P49682 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CXCR3P49682 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCR3P49682 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCR3P49682 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CXCR3P49682 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCR3P49682 FAM207CP-201ENST00000443486 507 ntBASIC16.34■□□□□ 0.21
CXCR3P49682 SPTLC1P1-201ENST00000447199 261 ntBASIC16.34■□□□□ 0.21
CXCR3P49682 MEIS3P1-201ENST00000495167 958 ntBASIC16.34■□□□□ 0.21
CXCR3P49682 SERBP1P5-201ENST00000510079 1181 ntBASIC16.34■□□□□ 0.21
CXCR3P49682 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCR3P49682 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CXCR3P49682 AC009118.2-201ENST00000613275 655 ntBASIC16.34■□□□□ 0.21
CXCR3P49682 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CXCR3P49682 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CXCR3P49682 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCR3P49682 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.34■□□□□ 0.21
CXCR3P49682 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.34■□□□□ 0.21
CXCR3P49682 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCR3P49682 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.34■□□□□ 0.21
CXCR3P49682 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CXCR3P49682 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CXCR3P49682 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CXCR3P49682 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR3P49682 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR3P49682 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR3P49682 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR3P49682 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR3P49682 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR3P49682 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CXCR3P49682 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
CXCR3P49682 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
CXCR3P49682 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCR3P49682 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCR3P49682 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCR3P49682 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCR3P49682 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CXCR3P49682 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCR3P49682 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
CXCR3P49682 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CXCR3P49682 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCR3P49682 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCR3P49682 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCR3P49682 RN7SL204P-201ENST00000582831 262 ntBASIC16.33■□□□□ 0.2
CXCR3P49682 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCR3P49682 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.33■□□□□ 0.2
CXCR3P49682 AC092850.2-201ENST00000623821 2697 ntBASIC16.33■□□□□ 0.2
CXCR3P49682 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.33■□□□□ 0.2
CXCR3P49682 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCR3P49682 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CXCR3P49682 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.33■□□□□ 0.2
CXCR3P49682 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.33■□□□□ 0.2
CXCR3P49682 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
CXCR3P49682 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CXCR3P49682 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms