Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SLC6A6P1-201ENST00000413933 1850 ntBASIC18.09■□□□□ 0.49
CLCN1P35523 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCN1P35523 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCN1P35523 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCN1P35523 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCN1P35523 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
CLCN1P35523 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLCN1P35523 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CLCN1P35523 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 TOP3BP1-201ENST00000420768 1380 ntBASIC18.09■□□□□ 0.49
CLCN1P35523 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCN1P35523 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLCN1P35523 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CLCN1P35523 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCN1P35523 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 KRT18P67-201ENST00000432816 1264 ntBASIC18.09■□□□□ 0.49
CLCN1P35523 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 RPS15P9-201ENST00000494093 319 ntBASIC18.09■□□□□ 0.49
CLCN1P35523 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCN1P35523 RN7SL371P-201ENST00000578099 267 ntBASIC18.09■□□□□ 0.49
CLCN1P35523 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLCN1P35523 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CLCN1P35523 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.09■□□□□ 0.49
CLCN1P35523 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CLCN1P35523 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CLCN1P35523 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CLCN1P35523 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLCN1P35523 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.09■□□□□ 0.49
CLCN1P35523 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCN1P35523 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC18.08■□□□□ 0.49
CLCN1P35523 AP002414.3-201ENST00000589352 1468 ntBASIC18.08■□□□□ 0.49
CLCN1P35523 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCN1P35523 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CLCN1P35523 AC067930.6-201ENST00000623257 4947 ntBASIC18.08■□□□□ 0.49
CLCN1P35523 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.08■□□□□ 0.49
CLCN1P35523 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CLCN1P35523 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.08■□□□□ 0.49
CLCN1P35523 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC18.08■□□□□ 0.49
CLCN1P35523 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CLCN1P35523 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCN1P35523 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCN1P35523 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLCN1P35523 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CLCN1P35523 AC118758.2-201ENST00000614242 2813 ntBASIC18.08■□□□□ 0.48
CLCN1P35523 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN1P35523 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN1P35523 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN1P35523 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCN1P35523 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.08■□□□□ 0.48
CLCN1P35523 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN1P35523 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCN1P35523 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CLCN1P35523 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCN1P35523 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN1P35523 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.08■□□□□ 0.48
CLCN1P35523 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.08■□□□□ 0.48
CLCN1P35523 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCN1P35523 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN1P35523 PGM5P2-202ENST00000637225 1043 ntBASIC18.08■□□□□ 0.48
CLCN1P35523 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.08■□□□□ 0.48
CLCN1P35523 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN1P35523 AC089987.1-201ENST00000551654 2209 ntBASIC18.08■□□□□ 0.48
CLCN1P35523 SLC22A20-204ENST00000530038 1673 ntBASIC18.08■□□□□ 0.48
CLCN1P35523 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCN1P35523 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN1P35523 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN1P35523 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN1P35523 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC18.08■□□□□ 0.48
CLCN1P35523 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLCN1P35523 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CLCN1P35523 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
CLCN1P35523 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLCN1P35523 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCN1P35523 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCN1P35523 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLCN1P35523 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLCN1P35523 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN1P35523 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.07■□□□□ 0.48
CLCN1P35523 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCN1P35523 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms