Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.051e-7■■■□□ 15
U2AF2P26368 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.111e-7■■■□□ 15
U2AF2P26368 HSPA12A-203ENST00000480802 624 ntTSL 311.01□□□□□ -0.651e-7■■■□□ 15
U2AF2P26368 RAB3GAP2-202ENST00000358951 7257 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.352e-12■■■□□ 15
U2AF2P26368 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.15■□□□□ 0.53e-6■■■□□ 15
U2AF2P26368 CUL4A-207ENST00000472083 574 ntTSL 57.1□□□□□ -1.277e-9■■■□□ 15
U2AF2P26368 PRR4-214ENST00000546317 281 ntTSL 52.01□□□□□ -2.099e-8■■■□□ 15
U2AF2P26368 BBX-216ENST00000454540 392 ntTSL 522.1■■□□□ 1.136e-10■■■□□ 15
U2AF2P26368 BBX-211ENST00000431630 601 ntTSL 413.06□□□□□ -0.326e-10■■■□□ 15
U2AF2P26368 BBX-215ENST00000449335 675 ntTSL 513.06□□□□□ -0.326e-10■■■□□ 15
U2AF2P26368 DCUN1D4-212ENST00000507659 551 ntTSL 410.95□□□□□ -0.666e-10■■■□□ 15
U2AF2P26368 DCUN1D4-210ENST00000505634 843 ntTSL 310.81□□□□□ -0.686e-10■■■□□ 15
U2AF2P26368 BBX-217ENST00000456419 871 ntTSL 59.95□□□□□ -0.826e-10■■■□□ 15
U2AF2P26368 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC8.98□□□□□ -0.976e-10■■■□□ 15
U2AF2P26368 BBX-202ENST00000402163 1586 ntTSL 58.36□□□□□ -1.076e-10■■■□□ 15
U2AF2P26368 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.266e-10■■■□□ 15
U2AF2P26368 BBX-225ENST00000485939 555 ntTSL 47□□□□□ -1.296e-10■■■□□ 15
U2AF2P26368 ALDH18A1-205ENST00000489386 543 ntTSL 36.45□□□□□ -1.386e-10■■■□□ 15
U2AF2P26368 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.78□□□□□ -1.486e-10■■■□□ 15
U2AF2P26368 BBX-218ENST00000456817 581 ntTSL 35.35□□□□□ -1.556e-10■■■□□ 15
U2AF2P26368 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.576e-10■■■□□ 15
U2AF2P26368 DCUN1D4-219ENST00000510808 560 ntTSL 44.66□□□□□ -1.666e-10■■■□□ 15
U2AF2P26368 DCUN1D4-218ENST00000510587 475 ntTSL 44.65□□□□□ -1.676e-10■■■□□ 15
U2AF2P26368 NKTR-206ENST00000460807 894 ntTSL 24.4□□□□□ -1.716e-10■■■□□ 15
U2AF2P26368 NKTR-218ENST00000508351 876 ntTSL 24.4□□□□□ -1.716e-10■■■□□ 15
U2AF2P26368 BBX-221ENST00000458458 513 ntTSL 44.27□□□□□ -1.736e-10■■■□□ 15
U2AF2P26368 BBX-209ENST00000427402 959 ntTSL 53.94□□□□□ -1.786e-10■■■□□ 15
U2AF2P26368 DCUN1D4-208ENST00000504923 562 ntTSL 41.84□□□□□ -2.116e-10■■■□□ 15
U2AF2P26368 ACTN1-211ENST00000553882 2636 ntTSL 216.82■□□□□ 0.281e-13■■■□□ 15
U2AF2P26368 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC16.33■□□□□ 0.21e-13■■■□□ 15
U2AF2P26368 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC16.29■□□□□ 0.21e-13■■■□□ 15
U2AF2P26368 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC15.48■□□□□ 0.071e-13■■■□□ 15
U2AF2P26368 ACTN1-214ENST00000555075 828 ntTSL 313.6□□□□□ -0.231e-13■■■□□ 15
U2AF2P26368 ACTN1-201ENST00000193403 3779 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.271e-13■■■□□ 15
U2AF2P26368 ACTN1-203ENST00000394419 3464 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.451e-13■■■□□ 15
U2AF2P26368 ACTN1-216ENST00000556083 4674 ntTSL 1 (best)11.6□□□□□ -0.551e-13■■■□□ 15
U2AF2P26368 YBX3-215ENST00000544504 583 ntTSL 310.9□□□□□ -0.665e-8■■■□□ 15
U2AF2P26368 YBX3-211ENST00000541351 717 ntTSL 410.33□□□□□ -0.765e-8■■■□□ 15
U2AF2P26368 WSB1-213ENST00000583193 552 ntTSL 4 BASIC13.29□□□□□ -0.282e-9■■■□□ 15
U2AF2P26368 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC13.29□□□□□ -0.282e-9■■■□□ 15
U2AF2P26368 WSB1-209ENST00000581185 1900 ntTSL 2 BASIC12.26□□□□□ -0.452e-9■■■□□ 15
U2AF2P26368 WSB1-205ENST00000487603 1898 ntTSL 211.66□□□□□ -0.543e-9■■■□□ 15
U2AF2P26368 CCDC144NL-AS1-205ENST00000439794 481 ntTSL 315.75■□□□□ 0.112e-7■■■□□ 15
U2AF2P26368 CTNND1-226ENST00000530720 832 ntTSL 44.93□□□□□ -1.621e-7■■■□□ 15
U2AF2P26368 EXTL2-207ENST00000535414 3146 ntTSL 5 BASIC14.13□□□□□ -0.154e-7■■■□□ 15
U2AF2P26368 EXTL2-202ENST00000370114 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.514e-7■■■□□ 15
U2AF2P26368 EXTL2-204ENST00000450240 902 ntTSL 45.82□□□□□ -1.484e-7■■■□□ 15
U2AF2P26368 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.824e-7■■■□□ 15
U2AF2P26368 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.898e-9■■■□□ 15
U2AF2P26368 OSBP-203ENST00000528903 873 ntTSL 29.09□□□□□ -0.958e-9■■■□□ 15
U2AF2P26368 OSBP-202ENST00000525357 991 ntTSL 1 (best)6.65□□□□□ -1.348e-9■■■□□ 15
U2AF2P26368 G2E3-211ENST00000552515 367 ntTSL 32.93□□□□□ -1.944e-8■■■□□ 15
U2AF2P26368 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.07■□□□□ 0.481e-6■■■□□ 15
U2AF2P26368 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.477e-7■■■□□ 15
U2AF2P26368 CPSF7-208ENST00000450000 574 ntTSL 424.28■■□□□ 1.489e-9■■■□□ 15
U2AF2P26368 CPSF7-204ENST00000413232 727 ntTSL 321.21■□□□□ 0.999e-9■■■□□ 15
U2AF2P26368 CPSF7-225ENST00000545934 565 ntTSL 418.18■□□□□ 0.59e-9■■■□□ 15
U2AF2P26368 CPSF7-223ENST00000544669 1800 ntTSL 515.08■□□□□ 09e-9■■■□□ 15
U2AF2P26368 CPSF7-207ENST00000449811 567 ntTSL 414.87□□□□□ -0.039e-9■■■□□ 15
U2AF2P26368 CPSF7-221ENST00000543545 495 ntTSL 511.56□□□□□ -0.569e-9■■■□□ 15
U2AF2P26368 CPSF7-217ENST00000537162 801 ntTSL 310.65□□□□□ -0.79e-9■■■□□ 15
U2AF2P26368 CPSF7-216ENST00000536548 598 ntTSL 49.14□□□□□ -0.959e-9■■■□□ 15
U2AF2P26368 CPSF7-215ENST00000536145 546 ntTSL 48.35□□□□□ -1.079e-9■■■□□ 15
U2AF2P26368 CPSF7-214ENST00000535222 940 ntTSL 38.27□□□□□ -1.099e-9■■■□□ 15
U2AF2P26368 CPSF7-224ENST00000544990 646 ntTSL 38.24□□□□□ -1.099e-9■■■□□ 15
U2AF2P26368 CPSF7-203ENST00000413184 571 ntTSL 47.97□□□□□ -1.139e-9■■■□□ 15
U2AF2P26368 CPSF7-219ENST00000539952 953 ntTSL 56.39□□□□□ -1.399e-9■■■□□ 15
U2AF2P26368 CPSF7-222ENST00000544585 722 ntTSL 26.38□□□□□ -1.399e-9■■■□□ 15
U2AF2P26368 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.9□□□□□ -1.469e-9■■■□□ 15
U2AF2P26368 JMJD1C-205ENST00000469152 734 ntTSL 33.46□□□□□ -1.862e-7■■■□□ 15
U2AF2P26368 JMJD1C-207ENST00000489372 913 ntTSL 52.59□□□□□ -1.992e-7■■■□□ 15
U2AF2P26368 ZNF207-204ENST00000394673 2124 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.779e-9■■■□□ 15
U2AF2P26368 SPAG9-215ENST00000513746 822 ntTSL 517.7■□□□□ 0.421e-6■■■□□ 15
U2AF2P26368 PRKAA1-208ENST00000511248 668 ntTSL 211.28□□□□□ -0.66e-10■■■□□ 15
U2AF2P26368 PRKAA1-203ENST00000397006 425 ntTSL 39.89□□□□□ -0.836e-10■■■□□ 15
U2AF2P26368 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.519e-9■■■□□ 15
U2AF2P26368 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.74■□□□□ 0.439e-9■■■□□ 15
U2AF2P26368 GCLM-203ENST00000467772 625 ntTSL 33.38□□□□□ -1.879e-9■■■□□ 15
U2AF2P26368 CNTROB-214ENST00000576723 2461 ntTSL 216.62■□□□□ 0.251e-7■■■□□ 14.9
U2AF2P26368 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.051e-7■■■□□ 14.9
U2AF2P26368 CNTROB-207ENST00000571632 2960 ntTSL 214.79□□□□□ -0.041e-7■■■□□ 14.9
U2AF2P26368 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.061e-7■■■□□ 14.9
U2AF2P26368 CNTROB-201ENST00000380262 3769 ntTSL 1 (best) BASIC14.4□□□□□ -0.11e-7■■■□□ 14.9
U2AF2P26368 KMT2E-213ENST00000485619 397 ntTSL 23.97□□□□□ -1.775e-17■■■□□ 14.9
U2AF2P26368 KMT2E-204ENST00000468607 558 ntTSL 21.69□□□□□ -2.145e-17■■■□□ 14.9
U2AF2P26368 LRRFIP2-210ENST00000440742 545 ntTSL 48.81□□□□□ -13e-9■■■□□ 14.9
U2AF2P26368 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.069e-7■■■□□ 14.9
U2AF2P26368 CRIM1-204ENST00000428774 700 ntTSL 312.48□□□□□ -0.415e-10■■■□□ 14.9
U2AF2P26368 CCNL2-216ENST00000488340 1598 ntTSL 225.31■■□□□ 1.641e-7■■■□□ 14.9
U2AF2P26368 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.121e-7■■■□□ 14.9
U2AF2P26368 CCNL2-213ENST00000481223 2815 ntTSL 221.78■■□□□ 1.081e-7■■■□□ 14.9
U2AF2P26368 CCNL2-218ENST00000496007 4452 ntTSL 215.94■□□□□ 0.141e-7■■■□□ 14.9
U2AF2P26368 SREK1-212ENST00000522912 2047 ntTSL 1 (best)19.54■□□□□ 0.723e-10■■■□□ 14.9
U2AF2P26368 SREK1-209ENST00000520953 2172 ntTSL 517.3■□□□□ 0.363e-10■■■□□ 14.9
U2AF2P26368 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.433e-10■■■□□ 14.9
U2AF2P26368 SREK1-215ENST00000524111 4074 ntTSL 59.9□□□□□ -0.823e-10■■■□□ 14.9
U2AF2P26368 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC7.27□□□□□ -1.253e-10■■■□□ 14.9
U2AF2P26368 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.88■□□□□ 0.133e-8■■■□□ 14.9
U2AF2P26368 PCBP1-AS1-227ENST00000435880 2386 ntTSL 1 (best) BASIC14.3□□□□□ -0.123e-8■■■□□ 14.9
U2AF2P26368 PCBP1-AS1-291ENST00000626440 461 ntTSL 5 BASIC11.95□□□□□ -0.53e-8■■■□□ 14.9
Retrieved 100 of 36,523 protein–RNA pairs in 295 ms