RNA–Protein interactions for RNA: ENST00000458458.5

BBX-221, Transcript of BBX, HMG-box containing, humanhuman

TSL 4

Gene BBX, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-221ENST00000458458 AEBP2Q6ZN18 517 aaPredicted RBP26.82■■□□□ 1.88
BBX-221ENST00000458458 CHIC1Q5VXU3 224 aa25.01■■□□□ 1.59
BBX-221ENST00000458458 SENP3Q9H4L4 574 aaPredicted RBP22.92■■□□□ 1.26
BBX-221ENST00000458458 PHF23Q9BUL5 403 aaPredicted RBP22.57■■□□□ 1.2
BBX-221ENST00000458458 FOXD1Q16676 465 aa21.44■■□□□ 1.02
BBX-221ENST00000458458 POTEDQ86YR6 584 aa20.61■□□□□ 0.89
BBX-221ENST00000458458 MSH5O43196 834 aa20.22■□□□□ 0.83
BBX-221ENST00000458458 PIAS4Q8N2W9 510 aaPredicted RBP19.91■□□□□ 0.78
BBX-221ENST00000458458 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
BBX-221ENST00000458458 PPP6R1Q9UPN7 881 aa19.69■□□□□ 0.74
BBX-221ENST00000458458 ADRA2BP18089 450 aa19.59■□□□□ 0.73
BBX-221ENST00000458458 MAPK8IP2Q13387 824 aaPredicted RBP18.15■□□□□ 0.5
BBX-221ENST00000458458 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
BBX-221ENST00000458458 SCAF1Q9H7N4 1312 aaKnown RBP17.87■□□□□ 0.45
BBX-221ENST00000458458 CACNB1Q02641 598 aaPredicted RBP17.68■□□□□ 0.42
BBX-221ENST00000458458 DCAF8L1A6NGE4 600 aa17.4■□□□□ 0.38
BBX-221ENST00000458458 HOXD11P31277 338 aaPredicted RBP17.23■□□□□ 0.35
BBX-221ENST00000458458 PPP4R3CPQ6ZMV5 832 aa17.23■□□□□ 0.35
BBX-221ENST00000458458 RNF39Q9H2S5 420 aa17.23■□□□□ 0.35
BBX-221ENST00000458458 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
BBX-221ENST00000458458 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
BBX-221ENST00000458458 C1QBPQ07021 282 aaKnown RBP16.93■□□□□ 0.3
BBX-221ENST00000458458 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
BBX-221ENST00000458458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.43■□□□□ 0.224e-7■■■■□ 23.5
BBX-221ENST00000458458 NCBP3Q53F19 620 aaKnown RBP16.38■□□□□ 0.21
BBX-221ENST00000458458 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
BBX-221ENST00000458458 POTEHQ6S545 545 aa16.05■□□□□ 0.16
BBX-221ENST00000458458 U3KPZ7 1027 aaPredicted RBP16.04■□□□□ 0.16
BBX-221ENST00000458458 DSG3P32926 999 aa15.98■□□□□ 0.15
BBX-221ENST00000458458 SPINK5Q9NQ38 1064 aaPredicted RBP15.97■□□□□ 0.15
BBX-221ENST00000458458 CAPN15O75808 1086 aa15.95■□□□□ 0.14
BBX-221ENST00000458458 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
BBX-221ENST00000458458 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
BBX-221ENST00000458458 ABCB7O75027 752 aa15.56■□□□□ 0.08
BBX-221ENST00000458458 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
BBX-221ENST00000458458 APLP2Q06481 763 aa15.48■□□□□ 0.07
BBX-221ENST00000458458 KCNA4P22459 653 aa15.45■□□□□ 0.06
BBX-221ENST00000458458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
BBX-221ENST00000458458 HNRNPUL2Q1KMD3 747 aaKnown RBP15.37■□□□□ 0.05
BBX-221ENST00000458458 SAMD1Q6SPF0 538 aaPredicted RBP15.27■□□□□ 0.04
BBX-221ENST00000458458 RBM42Q9BTD8 480 aaKnown RBP15.23■□□□□ 0.03
BBX-221ENST00000458458 CHRDL2Q6WN34 429 aa15.11■□□□□ 0.01
BBX-221ENST00000458458 POLA2Q14181 598 aa15.04■□□□□ -0
BBX-221ENST00000458458 MYCNP04198 464 aaPredicted RBP14.96□□□□□ -0.01
BBX-221ENST00000458458 SP7Q8TDD2 431 aaPredicted RBP14.81□□□□□ -0.04
BBX-221ENST00000458458 AKT1S1Q96B36 256 aa14.78□□□□□ -0.04
BBX-221ENST00000458458 ATF5Q9Y2D1 282 aaPredicted RBP14.7□□□□□ -0.06
BBX-221ENST00000458458 REM2Q8IYK8 340 aaPredicted RBP14.66□□□□□ -0.06
BBX-221ENST00000458458 ZBTB12Q9Y330 459 aaPredicted RBP14.66□□□□□ -0.06
BBX-221ENST00000458458 PIP4P2Q8N4L2 257 aa14.65□□□□□ -0.06
BBX-221ENST00000458458 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
BBX-221ENST00000458458 FOXD4L1Q9NU39 408 aa14.55□□□□□ -0.08
BBX-221ENST00000458458 HAX1O00165 279 aa14.52□□□□□ -0.09
BBX-221ENST00000458458 PITPNM1O00562 1244 aa14.52□□□□□ -0.09
BBX-221ENST00000458458 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.09
BBX-221ENST00000458458 SLC4A1APQ9BWU0 796 aaKnown RBP14.46□□□□□ -0.09
BBX-221ENST00000458458 EVX2Q03828 476 aa14.33□□□□□ -0.12
BBX-221ENST00000458458 ZBTB22O15209 634 aa14.21□□□□□ -0.13
BBX-221ENST00000458458 SPDYE2BA6NHP3 402 aa14.19□□□□□ -0.14
BBX-221ENST00000458458 SPDYE6P0CI01 402 aa14.19□□□□□ -0.14
BBX-221ENST00000458458 SPDYE2Q495Y8 402 aa14.19□□□□□ -0.14
BBX-221ENST00000458458 PRKAR2AP13861 404 aaKnown RBP14.13□□□□□ -0.15
BBX-221ENST00000458458 ATXN8OSP0DMR3 200 aa14.12□□□□□ -0.15
BBX-221ENST00000458458 FBLN2P98095 1184 aa14.11□□□□□ -0.15
BBX-221ENST00000458458 CLEC11AQ9Y240 323 aa14.09□□□□□ -0.15
BBX-221ENST00000458458 SPDYE1Q8NFV5 336 aaPredicted RBP14.07□□□□□ -0.16
BBX-221ENST00000458458 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
BBX-221ENST00000458458 MKRN4PQ13434 485 aaPredicted RBP13.99□□□□□ -0.17
BBX-221ENST00000458458 SSUH2Q9Y2M2 353 aa13.96□□□□□ -0.17
BBX-221ENST00000458458 GABBR2O75899 941 aa13.95□□□□□ -0.18
BBX-221ENST00000458458 ZNF692Q9BU19 519 aaPredicted RBP13.95□□□□□ -0.18
BBX-221ENST00000458458 LHX8Q68G74 356 aa13.89□□□□□ -0.19
BBX-221ENST00000458458 CHADLQ6NUI6 762 aa13.89□□□□□ -0.19
BBX-221ENST00000458458 PRR29P0C7W0 189 aa13.77□□□□□ -0.21
BBX-221ENST00000458458 PABPN1Q86U42 306 aaKnown RBP eCLIP13.74□□□□□ -0.21
BBX-221ENST00000458458 POTEIP0CG38 1075 aa13.67□□□□□ -0.22
BBX-221ENST00000458458 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
BBX-221ENST00000458458 FARP1Q9Y4F1 1045 aaPredicted RBP13.61□□□□□ -0.23
BBX-221ENST00000458458 CLCN6P51797 869 aa13.51□□□□□ -0.25
BBX-221ENST00000458458 DCBLD2Q96PD2 775 aa13.47□□□□□ -0.25
BBX-221ENST00000458458 ZNF579Q8NAF0 562 aaKnown RBP13.42□□□□□ -0.26
BBX-221ENST00000458458 PLSCR2Q9NRY7 297 aa13.42□□□□□ -0.26
BBX-221ENST00000458458 ZRANB1Q9UGI0 708 aa13.39□□□□□ -0.27
BBX-221ENST00000458458 CREBZFQ9NS37 354 aa13.33□□□□□ -0.28
BBX-221ENST00000458458 GALR2O43603 387 aaPredicted RBP13.31□□□□□ -0.28
BBX-221ENST00000458458 OTUD5Q96G74 571 aa13.26□□□□□ -0.29
BBX-221ENST00000458458 POTEB2H3BUK9 544 aa13.22□□□□□ -0.29
BBX-221ENST00000458458 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
BBX-221ENST00000458458 EHMT2Q96KQ7 1210 aa13.2□□□□□ -0.3
BBX-221ENST00000458458 PHF12Q96QT6 1004 aa13.17□□□□□ -0.3
BBX-221ENST00000458458 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
BBX-221ENST00000458458 POTEMA6NI47 508 aa13.1□□□□□ -0.31
BBX-221ENST00000458458 PELP1Q8IZL8 1130 aaKnown RBP13.1□□□□□ -0.31
BBX-221ENST00000458458 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
BBX-221ENST00000458458 SPDYE4A6NLX3 237 aa13.05□□□□□ -0.32
BBX-221ENST00000458458 POTEGQ6S5H5 508 aa13.05□□□□□ -0.32
BBX-221ENST00000458458 NPM1P06748 294 aaKnown RBP eCLIP13.04□□□□□ -0.32
BBX-221ENST00000458458 MNX1P50219 401 aaPredicted RBP13.04□□□□□ -0.32
BBX-221ENST00000458458 METRNQ9UJH8 293 aa12.99□□□□□ -0.33
BBX-221ENST00000458458 MS4A3Q96HJ5 214 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms