RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 NISCHQ9Y2I1 1504 aa13.58□□□□□ -0.24
CPSF7-215ENST00000536145 HRCP23327 699 aa11.81□□□□□ -0.52
CPSF7-215ENST00000536145 MYO15BQ96JP2 1530 aa11.65□□□□□ -0.54
CPSF7-215ENST00000536145 SHROOM4Q9ULL8 1493 aa11.62□□□□□ -0.55
CPSF7-215ENST00000536145 ZCCHC6Q5VYS8 1495 aaKnown RBP11.58□□□□□ -0.56
CPSF7-215ENST00000536145 CHIC1Q5VXU3 224 aa11.56□□□□□ -0.56
CPSF7-215ENST00000536145 SUPT5HO00267 1087 aaKnown RBP11.53□□□□□ -0.56
CPSF7-215ENST00000536145 DCAF1Q9Y4B6 1507 aa11.5□□□□□ -0.57
CPSF7-215ENST00000536145 PPARGC1BQ86YN6 1023 aaKnown RBP11.42□□□□□ -0.58
CPSF7-215ENST00000536145 PCGF6Q9BYE7 350 aa11.41□□□□□ -0.58
CPSF7-215ENST00000536145 CCDC180Q9P1Z9 1646 aa11.41□□□□□ -0.58
CPSF7-215ENST00000536145 PELP1Q8IZL8 1130 aaKnown RBP11.3□□□□□ -0.6
CPSF7-215ENST00000536145 TRIM26Q12899 539 aaPredicted RBP11.2□□□□□ -0.62
CPSF7-215ENST00000536145 LOC105371045A0A1W2PR82 267 aa11.14□□□□□ -0.63
CPSF7-215ENST00000536145 ZEB1P37275 1124 aaPredicted RBP11.14□□□□□ -0.63
CPSF7-215ENST00000536145 SCAF1Q9H7N4 1312 aaKnown RBP11.09□□□□□ -0.63
CPSF7-215ENST00000536145 ABCC9O60706 1549 aa10.99□□□□□ -0.65
CPSF7-215ENST00000536145 AEBP2Q6ZN18 517 aaPredicted RBP10.97□□□□□ -0.65
CPSF7-215ENST00000536145 RSF1Q96T23 1441 aaPredicted RBP10.87□□□□□ -0.67
CPSF7-215ENST00000536145 ACIN1Q9UKV3 1341 aaKnown RBP10.85□□□□□ -0.67
CPSF7-215ENST00000536145 MYT1Q01538 1121 aa10.85□□□□□ -0.67
CPSF7-215ENST00000536145 RB1CC1Q8TDY2 1594 aa10.82□□□□□ -0.68
CPSF7-215ENST00000536145 DCAF8L2P0C7V8 631 aa10.81□□□□□ -0.68
CPSF7-215ENST00000536145 NEUROD1Q13562 356 aa10.78□□□□□ -0.68
CPSF7-215ENST00000536145 TRIM41Q8WV44 630 aa10.75□□□□□ -0.69
CPSF7-215ENST00000536145 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
CPSF7-215ENST00000536145 GTF3C3Q9Y5Q9 886 aa10.66□□□□□ -0.7
CPSF7-215ENST00000536145 WRNQ14191 1432 aaPredicted RBP eCLIP10.65□□□□□ -0.7
CPSF7-215ENST00000536145 CENPBP07199 599 aaPredicted RBP10.64□□□□□ -0.71
CPSF7-215ENST00000536145 SCRIBQ14160 1630 aa10.63□□□□□ -0.71
CPSF7-215ENST00000536145 FAM9AQ8IZU1 332 aaPredicted RBP10.62□□□□□ -0.71
CPSF7-215ENST00000536145 DIEXFQ68CQ4 756 aaKnown RBP10.61□□□□□ -0.71
CPSF7-215ENST00000536145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.6□□□□□ -0.71
CPSF7-215ENST00000536145 CCER1Q8TC90 406 aaPredicted RBP10.57□□□□□ -0.72
CPSF7-215ENST00000536145 MROH2BQ7Z745 1585 aa10.56□□□□□ -0.72
CPSF7-215ENST00000536145 CECR2Q9BXF3 1484 aa10.54□□□□□ -0.72
CPSF7-215ENST00000536145 BAZ1AQ9NRL2 1556 aaPredicted RBP10.52□□□□□ -0.73
CPSF7-215ENST00000536145 ZNF316A6NFI3 1004 aaPredicted RBP10.51□□□□□ -0.73
CPSF7-215ENST00000536145 WIZO95785 1651 aa10.49□□□□□ -0.73
CPSF7-215ENST00000536145 TNIKQ9UKE5 1360 aa10.47□□□□□ -0.73
CPSF7-215ENST00000536145 CEP162Q5TB80 1403 aa10.45□□□□□ -0.74
CPSF7-215ENST00000536145 NACADO15069 1562 aa10.43□□□□□ -0.74
CPSF7-215ENST00000536145 EHMT2Q96KQ7 1210 aa10.42□□□□□ -0.74
CPSF7-215ENST00000536145 EEA1Q15075 1411 aa10.4□□□□□ -0.75
CPSF7-215ENST00000536145 CCDC88BA6NC98 1476 aa10.39□□□□□ -0.75
CPSF7-215ENST00000536145 TOP2AP11388 1531 aaKnown RBP10.38□□□□□ -0.75
CPSF7-215ENST00000536145 MIER1Q8N108 512 aa10.38□□□□□ -0.75
CPSF7-215ENST00000536145 ABCC8Q09428 1581 aa10.35□□□□□ -0.75
CPSF7-215ENST00000536145 CLSPNQ9HAW4 1339 aa10.34□□□□□ -0.75
CPSF7-215ENST00000536145 SMARCA2P51531 1590 aa10.34□□□□□ -0.75
CPSF7-215ENST00000536145 SOGA1O94964 1423 aa10.33□□□□□ -0.76
CPSF7-215ENST00000536145 GOLGA3Q08378 1498 aa10.31□□□□□ -0.76
CPSF7-215ENST00000536145 RUSC2Q8N2Y8 1516 aa10.29□□□□□ -0.76
CPSF7-215ENST00000536145 CSRNP3Q8WYN3 585 aa10.29□□□□□ -0.76
CPSF7-215ENST00000536145 KIF21BO75037 1637 aa10.27□□□□□ -0.77
CPSF7-215ENST00000536145 YTHDC1Q96MU7 727 aaKnown RBP10.27□□□□□ -0.77
CPSF7-215ENST00000536145 SMARCA4P51532 1647 aa10.25□□□□□ -0.77
CPSF7-215ENST00000536145 SUPT16HQ9Y5B9 1047 aaKnown RBP10.23□□□□□ -0.77
CPSF7-215ENST00000536145 PABPN1Q86U42 306 aaKnown RBP eCLIP10.22□□□□□ -0.77
CPSF7-215ENST00000536145 VPS8Q8N3P4 1428 aa10.22□□□□□ -0.77
CPSF7-215ENST00000536145 TSHZ2Q9NRE2 1034 aa10.21□□□□□ -0.77
CPSF7-215ENST00000536145 TTBK1Q5TCY1 1321 aaPredicted RBP10.21□□□□□ -0.78
CPSF7-215ENST00000536145 CEP164Q9UPV0 1460 aa10.21□□□□□ -0.78
CPSF7-215ENST00000536145 BAZ1BQ9UIG0 1483 aaKnown RBP10.2□□□□□ -0.78
CPSF7-215ENST00000536145 CLIP1P30622 1438 aa10.19□□□□□ -0.78
CPSF7-215ENST00000536145 DHX57Q6P158 1386 aaKnown RBP10.18□□□□□ -0.78
CPSF7-215ENST00000536145 ANP32EQ9BTT0 268 aa10.18□□□□□ -0.78
CPSF7-215ENST00000536145 HNRNPUL2Q1KMD3 747 aaKnown RBP10.15□□□□□ -0.78
CPSF7-215ENST00000536145 CUX2O14529 1486 aa10.15□□□□□ -0.78
CPSF7-215ENST00000536145 UBTFP17480 764 aaKnown RBP10.14□□□□□ -0.79
CPSF7-215ENST00000536145 SYNJ1O43426 1573 aa10.13□□□□□ -0.79
CPSF7-215ENST00000536145 PEG3Q9GZU2 1588 aa10.11□□□□□ -0.79
CPSF7-215ENST00000536145 RRBP1Q9P2E9 1410 aaKnown RBP10.08□□□□□ -0.8
CPSF7-215ENST00000536145 BCL11AQ9H165 835 aa10.08□□□□□ -0.8
CPSF7-215ENST00000536145 RAPGEF2Q9Y4G8 1499 aa10.07□□□□□ -0.8
CPSF7-215ENST00000536145 ARAP1Q96P48 1450 aa10.05□□□□□ -0.8
CPSF7-215ENST00000536145 UNC13AQ9UPW8 1703 aa10.04□□□□□ -0.8
CPSF7-215ENST00000536145 ERICH3Q5RHP9 1530 aa10.03□□□□□ -0.8
CPSF7-215ENST00000536145 PRXQ9BXM0 1461 aa10.01□□□□□ -0.81
CPSF7-215ENST00000536145 BICRAQ9NZM4 1560 aa10□□□□□ -0.81
CPSF7-215ENST00000536145 MAPKBP1O60336 1514 aa9.99□□□□□ -0.81
CPSF7-215ENST00000536145 TOP2BQ02880 1626 aa9.98□□□□□ -0.81
CPSF7-215ENST00000536145 BIVM-ERCC5R4GMW8 1640 aa9.98□□□□□ -0.81
CPSF7-215ENST00000536145 APLP2Q06481 763 aa9.97□□□□□ -0.81
CPSF7-215ENST00000536145 KANK4Q5T7N3 995 aaPredicted RBP9.95□□□□□ -0.82
CPSF7-215ENST00000536145 KCNH8Q96L42 1107 aa9.95□□□□□ -0.82
CPSF7-215ENST00000536145 MAP3K1Q13233 1512 aa9.92□□□□□ -0.82
CPSF7-215ENST00000536145 CCNB3Q8WWL7 1395 aa9.92□□□□□ -0.82
CPSF7-215ENST00000536145 PPP1R15AO75807 674 aaPredicted RBP9.92□□□□□ -0.82
CPSF7-215ENST00000536145 RBM19Q9Y4C8 960 aaKnown RBP9.92□□□□□ -0.82
CPSF7-215ENST00000536145 ATAD2BQ9ULI0 1458 aa9.91□□□□□ -0.82
CPSF7-215ENST00000536145 CCER2I3L3R5 266 aa9.9□□□□□ -0.82
CPSF7-215ENST00000536145 FKBP8Q14318 412 aa9.9□□□□□ -0.82
CPSF7-215ENST00000536145 WDR97A6NE52 1622 aa9.89□□□□□ -0.83
CPSF7-215ENST00000536145 RAB3GAP2Q9H2M9 1393 aa9.88□□□□□ -0.83
CPSF7-215ENST00000536145 ARHGAP35Q9NRY4 1499 aa9.88□□□□□ -0.83
CPSF7-215ENST00000536145 MSH5O43196 834 aa9.88□□□□□ -0.83
CPSF7-215ENST00000536145 FANCIQ9NVI1 1328 aa9.86□□□□□ -0.83
CPSF7-215ENST00000536145 SETD5Q9C0A6 1442 aa9.85□□□□□ -0.83
CPSF7-215ENST00000536145 BCANQ96GW7 911 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms