Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CHMP24386 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.88□□□□□ -0.03
CHMP24386 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHMP24386 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHMP24386 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHMP24386 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.87□□□□□ -0.03
CHMP24386 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.87□□□□□ -0.03
CHMP24386 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CHMP24386 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CHMP24386 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CHMP24386 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CHMP24386 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.87□□□□□ -0.03
CHMP24386 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.87□□□□□ -0.03
CHMP24386 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.87□□□□□ -0.03
CHMP24386 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.87□□□□□ -0.03
CHMP24386 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
CHMP24386 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 RFPL4AP1-201ENST00000530883 850 ntBASIC14.87□□□□□ -0.03
CHMP24386 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 AL512356.2-201ENST00000546955 174 ntBASIC14.87□□□□□ -0.03
CHMP24386 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHMP24386 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.87□□□□□ -0.03
CHMP24386 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.87□□□□□ -0.03
CHMP24386 AP001059.3-201ENST00000619053 235 ntBASIC14.87□□□□□ -0.03
CHMP24386 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CHMP24386 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHMP24386 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CHMP24386 AC073439.1-201ENST00000624121 1774 ntBASIC14.87□□□□□ -0.03
CHMP24386 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.87□□□□□ -0.03
CHMP24386 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.87□□□□□ -0.03
CHMP24386 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CHMP24386 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CHMP24386 CICP13-201ENST00000422015 2789 ntBASIC14.87□□□□□ -0.03
CHMP24386 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.87□□□□□ -0.03
CHMP24386 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHMP24386 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CHMP24386 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.86□□□□□ -0.03
CHMP24386 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.86□□□□□ -0.03
CHMP24386 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CHMP24386 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP24386 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP24386 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CHMP24386 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CHMP24386 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
CHMP24386 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP24386 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.86□□□□□ -0.03
CHMP24386 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP24386 AC067863.1-201ENST00000494933 530 ntBASIC14.86□□□□□ -0.03
CHMP24386 SLC25A39P2-201ENST00000537614 270 ntBASIC14.86□□□□□ -0.03
CHMP24386 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP24386 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.86□□□□□ -0.03
CHMP24386 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.86□□□□□ -0.03
CHMP24386 AC015911.4-201ENST00000588022 1070 ntBASIC14.86□□□□□ -0.03
CHMP24386 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.86□□□□□ -0.03
CHMP24386 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.86□□□□□ -0.03
CHMP24386 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CHMP24386 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CHMP24386 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms