Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB3BP20337 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB3BP20337 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
RAB3BP20337 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB3BP20337 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 HMGA1P7-201ENST00000406908 502 ntBASIC13.94□□□□□ -0.18
RAB3BP20337 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB3BP20337 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB3BP20337 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB3BP20337 DUSP5P1-201ENST00000441325 1139 ntBASIC13.94□□□□□ -0.18
RAB3BP20337 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.94□□□□□ -0.18
RAB3BP20337 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB3BP20337 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB3BP20337 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
RAB3BP20337 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB3BP20337 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.94□□□□□ -0.18
RAB3BP20337 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB3BP20337 AC025062.2-201ENST00000605477 670 ntBASIC13.94□□□□□ -0.18
RAB3BP20337 AC008667.4-201ENST00000607370 168 ntBASIC13.94□□□□□ -0.18
RAB3BP20337 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.94□□□□□ -0.18
RAB3BP20337 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB3BP20337 AJ011931.1-201ENST00000618749 2492 ntBASIC13.94□□□□□ -0.18
RAB3BP20337 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
RAB3BP20337 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
RAB3BP20337 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB3BP20337 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
RAB3BP20337 PTENP1-202ENST00000532280 3996 ntBASIC13.94□□□□□ -0.18
RAB3BP20337 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
RAB3BP20337 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.94□□□□□ -0.18
RAB3BP20337 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB3BP20337 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
RAB3BP20337 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB3BP20337 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB3BP20337 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAB3BP20337 AC127383.1-201ENST00000444697 1800 ntBASIC13.93□□□□□ -0.18
RAB3BP20337 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.93□□□□□ -0.18
RAB3BP20337 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.93□□□□□ -0.18
RAB3BP20337 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.93□□□□□ -0.18
RAB3BP20337 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAB3BP20337 AC008608.2-201ENST00000606089 416 ntBASIC13.93□□□□□ -0.18
RAB3BP20337 AC066615.1-201ENST00000640911 628 ntBASIC13.93□□□□□ -0.18
RAB3BP20337 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB3BP20337 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.93□□□□□ -0.18
RAB3BP20337 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
RAB3BP20337 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
RAB3BP20337 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.93□□□□□ -0.18
RAB3BP20337 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RAB3BP20337 AC023024.2-201ENST00000623561 1993 ntBASIC13.92□□□□□ -0.18
RAB3BP20337 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RAB3BP20337 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms