Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NCLP19338 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.97■□□□□ 0.63
NCLP19338 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.97■□□□□ 0.63
NCLP19338 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NCLP19338 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.97■□□□□ 0.63
NCLP19338 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NCLP19338 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NCLP19338 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NCLP19338 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NCLP19338 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NCLP19338 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NCLP19338 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NCLP19338 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
NCLP19338 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NCLP19338 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.96■□□□□ 0.63
NCLP19338 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.96■□□□□ 0.63
NCLP19338 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 AC006486.2-201ENST00000624246 2199 ntBASIC18.96■□□□□ 0.63
NCLP19338 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
NCLP19338 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 AC138969.2-201ENST00000532739 9932 ntBASIC18.96■□□□□ 0.63
NCLP19338 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 CICP13-201ENST00000422015 2789 ntBASIC18.96■□□□□ 0.63
NCLP19338 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 BX842568.4-201ENST00000421222 227 ntBASIC18.96■□□□□ 0.63
NCLP19338 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.96■□□□□ 0.63
NCLP19338 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.96■□□□□ 0.63
NCLP19338 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.96■□□□□ 0.63
NCLP19338 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.96■□□□□ 0.63
NCLP19338 AC108751.1-201ENST00000490852 363 ntBASIC18.96■□□□□ 0.63
NCLP19338 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.96■□□□□ 0.63
NCLP19338 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
NCLP19338 AC092865.5-201ENST00000545435 363 ntBASIC18.96■□□□□ 0.63
NCLP19338 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.96■□□□□ 0.63
NCLP19338 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
NCLP19338 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NCLP19338 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NCLP19338 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.96■□□□□ 0.63
NCLP19338 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NCLP19338 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.95■□□□□ 0.62
NCLP19338 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 AC012569.1-201ENST00000591191 1524 ntBASIC18.95■□□□□ 0.62
NCLP19338 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
NCLP19338 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NCLP19338 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NCLP19338 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.95■□□□□ 0.62
NCLP19338 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.95■□□□□ 0.62
NCLP19338 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.95■□□□□ 0.62
NCLP19338 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.95■□□□□ 0.62
NCLP19338 AC139530.3-201ENST00000620344 690 ntBASIC18.95■□□□□ 0.62
NCLP19338 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.95■□□□□ 0.62
NCLP19338 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
NCLP19338 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NCLP19338 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NCLP19338 AL592424.1-201ENST00000563624 1536 ntBASIC18.95■□□□□ 0.62
NCLP19338 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NCLP19338 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NCLP19338 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
NCLP19338 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.94■□□□□ 0.62
NCLP19338 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms