Protein–RNA interactions for Protein: P09327

VIL1, Villin-1, humanhuman

Known RBP Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1P09327 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VIL1P09327 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VIL1P09327 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VIL1P09327 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VIL1P09327 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.67■□□□□ 0.58
VIL1P09327 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
VIL1P09327 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
VIL1P09327 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
VIL1P09327 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.67■□□□□ 0.58
VIL1P09327 NUS1P3-201ENST00000423502 862 ntBASIC18.67■□□□□ 0.58
VIL1P09327 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.67■□□□□ 0.58
VIL1P09327 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.67■□□□□ 0.58
VIL1P09327 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.67■□□□□ 0.58
VIL1P09327 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 AC126915.1-201ENST00000522847 1038 ntBASIC18.67■□□□□ 0.58
VIL1P09327 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
VIL1P09327 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.67■□□□□ 0.58
VIL1P09327 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.67■□□□□ 0.58
VIL1P09327 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC18.67■□□□□ 0.58
VIL1P09327 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC18.67■□□□□ 0.58
VIL1P09327 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.67■□□□□ 0.58
VIL1P09327 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.67■□□□□ 0.58
VIL1P09327 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.67■□□□□ 0.58
VIL1P09327 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.67■□□□□ 0.58
VIL1P09327 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC18.67■□□□□ 0.58
VIL1P09327 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.67■□□□□ 0.58
VIL1P09327 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
VIL1P09327 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.67■□□□□ 0.58
VIL1P09327 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
VIL1P09327 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
VIL1P09327 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
VIL1P09327 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
VIL1P09327 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
VIL1P09327 AL354989.2-201ENST00000435838 1540 ntBASIC18.66■□□□□ 0.58
VIL1P09327 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.66■□□□□ 0.58
VIL1P09327 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.66■□□□□ 0.58
VIL1P09327 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.66■□□□□ 0.58
VIL1P09327 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC18.66■□□□□ 0.58
VIL1P09327 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.66■□□□□ 0.58
VIL1P09327 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 NKG7-204ENST00000595217 816 ntTSL 2 BASIC18.66■□□□□ 0.58
VIL1P09327 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
VIL1P09327 AL451050.2-201ENST00000606967 682 ntBASIC18.66■□□□□ 0.58
VIL1P09327 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.66■□□□□ 0.58
VIL1P09327 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.66■□□□□ 0.58
VIL1P09327 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.66■□□□□ 0.58
VIL1P09327 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.66■□□□□ 0.58
VIL1P09327 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.66■□□□□ 0.58
VIL1P09327 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
VIL1P09327 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.66■□□□□ 0.58
VIL1P09327 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.66■□□□□ 0.58
VIL1P09327 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VIL1P09327 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VIL1P09327 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VIL1P09327 AL023775.1-201ENST00000454907 1746 ntBASIC18.66■□□□□ 0.58
VIL1P09327 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VIL1P09327 AGGF1P2-201ENST00000426656 2106 ntBASIC18.65■□□□□ 0.58
VIL1P09327 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
VIL1P09327 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VIL1P09327 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VIL1P09327 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.65■□□□□ 0.58
VIL1P09327 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
VIL1P09327 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VIL1P09327 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VIL1P09327 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.65■□□□□ 0.58
VIL1P09327 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.65■□□□□ 0.58
VIL1P09327 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC18.65■□□□□ 0.58
VIL1P09327 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms