Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
APOA1P02647 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.21□□□□□ -0.13
APOA1P02647 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.21□□□□□ -0.13
APOA1P02647 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
APOA1P02647 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.21□□□□□ -0.13
APOA1P02647 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.21□□□□□ -0.13
APOA1P02647 AC112907.2-201ENST00000448639 330 ntBASIC14.21□□□□□ -0.13
APOA1P02647 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.21□□□□□ -0.13
APOA1P02647 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.21□□□□□ -0.13
APOA1P02647 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.21□□□□□ -0.13
APOA1P02647 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.21□□□□□ -0.13
APOA1P02647 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.21□□□□□ -0.13
APOA1P02647 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.21□□□□□ -0.13
APOA1P02647 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
APOA1P02647 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
APOA1P02647 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
APOA1P02647 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.21□□□□□ -0.13
APOA1P02647 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 SIGLEC16-201ENST00000599858 1437 ntBASIC14.21□□□□□ -0.13
APOA1P02647 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOA1P02647 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.21□□□□□ -0.13
APOA1P02647 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOA1P02647 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOA1P02647 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.21□□□□□ -0.14
APOA1P02647 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
APOA1P02647 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOA1P02647 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
APOA1P02647 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.2□□□□□ -0.14
APOA1P02647 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA1P02647 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA1P02647 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
APOA1P02647 SON-203ENST00000381679 7860 ntTSL 5 BASIC14.2□□□□□ -0.14
APOA1P02647 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA1P02647 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 STRCP1-201ENST00000509801 5328 ntBASIC14.2□□□□□ -0.14
APOA1P02647 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
APOA1P02647 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 TSPY22P-201ENST00000427496 604 ntBASIC14.2□□□□□ -0.14
APOA1P02647 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.2□□□□□ -0.14
APOA1P02647 KRT18P38-201ENST00000449496 1282 ntBASIC14.2□□□□□ -0.14
APOA1P02647 VENTXP7-201ENST00000475503 772 ntBASIC14.2□□□□□ -0.14
APOA1P02647 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA1P02647 AC091167.2-201ENST00000579581 588 ntBASIC14.2□□□□□ -0.14
APOA1P02647 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
APOA1P02647 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
APOA1P02647 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
APOA1P02647 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.2□□□□□ -0.14
APOA1P02647 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
APOA1P02647 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA1P02647 AL122018.1-201ENST00000446607 2310 ntBASIC14.2□□□□□ -0.14
APOA1P02647 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.2□□□□□ -0.14
APOA1P02647 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
APOA1P02647 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA1P02647 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 LINC01230-201ENST00000625222 3017 ntBASIC14.2□□□□□ -0.14
APOA1P02647 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOA1P02647 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.2□□□□□ -0.14
APOA1P02647 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.19□□□□□ -0.14
APOA1P02647 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms