Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SNX4O95219 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
SNX4O95219 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SNX4O95219 FAM220BP-201ENST00000377689 816 ntBASIC14.98□□□□□ -0.01
SNX4O95219 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SNX4O95219 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
SNX4O95219 FAM86GP-201ENST00000448322 971 ntBASIC14.98□□□□□ -0.01
SNX4O95219 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.98□□□□□ -0.01
SNX4O95219 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.98□□□□□ -0.01
SNX4O95219 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.98□□□□□ -0.01
SNX4O95219 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SNX4O95219 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.98□□□□□ -0.01
SNX4O95219 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.98□□□□□ -0.01
SNX4O95219 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SNX4O95219 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.98□□□□□ -0.01
SNX4O95219 AC023157.3-201ENST00000619086 2088 ntBASIC14.97□□□□□ -0.01
SNX4O95219 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SNX4O95219 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SNX4O95219 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.97□□□□□ -0.01
SNX4O95219 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.97□□□□□ -0.01
SNX4O95219 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SNX4O95219 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SNX4O95219 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.97□□□□□ -0.01
SNX4O95219 SPDYE14P-201ENST00000442619 822 ntBASIC14.97□□□□□ -0.01
SNX4O95219 POU5F1P6-201ENST00000466990 990 ntBASIC14.97□□□□□ -0.01
SNX4O95219 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.97□□□□□ -0.01
SNX4O95219 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SNX4O95219 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.97□□□□□ -0.01
SNX4O95219 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.97□□□□□ -0.01
SNX4O95219 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.97□□□□□ -0.01
SNX4O95219 RARRES2P9-201ENST00000565168 469 ntBASIC14.97□□□□□ -0.01
SNX4O95219 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.97□□□□□ -0.01
SNX4O95219 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.97□□□□□ -0.01
SNX4O95219 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.97□□□□□ -0.01
SNX4O95219 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SNX4O95219 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.97□□□□□ -0.01
SNX4O95219 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.97□□□□□ -0.01
SNX4O95219 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SNX4O95219 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SNX4O95219 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SNX4O95219 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.96□□□□□ -0.01
SNX4O95219 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.96□□□□□ -0.01
SNX4O95219 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SNX4O95219 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 AP005117.1-202ENST00000581724 1908 ntBASIC14.96□□□□□ -0.01
SNX4O95219 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SNX4O95219 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.96□□□□□ -0.01
SNX4O95219 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SNX4O95219 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.96□□□□□ -0.01
SNX4O95219 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.96□□□□□ -0.01
SNX4O95219 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms