Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CDC7O00311 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 AC023157.3-201ENST00000619086 2088 ntBASIC15.56■□□□□ 0.08
CDC7O00311 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CDC7O00311 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDC7O00311 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CDC7O00311 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CDC7O00311 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDC7O00311 C18orf15-201ENST00000623680 2534 ntBASIC15.55■□□□□ 0.08
CDC7O00311 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC7O00311 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC7O00311 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 AL607033.1-201ENST00000623900 1599 ntBASIC15.55■□□□□ 0.08
CDC7O00311 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CDC7O00311 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.55■□□□□ 0.08
CDC7O00311 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CDC7O00311 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.55■□□□□ 0.08
CDC7O00311 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CDC7O00311 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
CDC7O00311 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC7O00311 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.55■□□□□ 0.08
CDC7O00311 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.55■□□□□ 0.08
CDC7O00311 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.55■□□□□ 0.08
CDC7O00311 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.55■□□□□ 0.08
CDC7O00311 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC7O00311 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CDC7O00311 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDC7O00311 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC7O00311 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC7O00311 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC7O00311 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC7O00311 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.55■□□□□ 0.08
CDC7O00311 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.55■□□□□ 0.08
CDC7O00311 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.55■□□□□ 0.08
CDC7O00311 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.55■□□□□ 0.08
CDC7O00311 RN7SL828P-201ENST00000607615 303 ntBASIC15.55■□□□□ 0.08
CDC7O00311 AC007967.4-201ENST00000614700 386 ntBASIC15.55■□□□□ 0.08
CDC7O00311 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.55■□□□□ 0.08
CDC7O00311 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.55■□□□□ 0.08
CDC7O00311 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDC7O00311 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDC7O00311 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDC7O00311 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC7O00311 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.54■□□□□ 0.08
CDC7O00311 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.54■□□□□ 0.08
CDC7O00311 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDC7O00311 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC7O00311 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CDC7O00311 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC7O00311 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC7O00311 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC7O00311 CNN2P11-201ENST00000429351 262 ntBASIC15.54■□□□□ 0.08
CDC7O00311 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC7O00311 HIST3H2BA-201ENST00000436555 524 ntBASIC15.54■□□□□ 0.08
CDC7O00311 MTND6P24-201ENST00000440466 518 ntBASIC15.54■□□□□ 0.08
CDC7O00311 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.54■□□□□ 0.08
CDC7O00311 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.54■□□□□ 0.08
CDC7O00311 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 MIR6080-201ENST00000617359 66 ntBASIC15.54■□□□□ 0.08
CDC7O00311 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.54■□□□□ 0.08
CDC7O00311 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.54■□□□□ 0.08
CDC7O00311 AC134684.3-201ENST00000641758 218 ntBASIC15.54■□□□□ 0.08
CDC7O00311 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC7O00311 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDC7O00311 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.54■□□□□ 0.08
CDC7O00311 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms