Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 MIR4321-201ENST00000592276 80 ntBASIC16.16■□□□□ 0.18
EBF1Q9UH73 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.16■□□□□ 0.18
EBF1Q9UH73 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 LINC01144-201ENST00000626198 1710 ntBASIC16.16■□□□□ 0.18
EBF1Q9UH73 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.16■□□□□ 0.18
EBF1Q9UH73 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 Z97205.2-201ENST00000564697 1639 ntBASIC16.16■□□□□ 0.18
EBF1Q9UH73 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
EBF1Q9UH73 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 REXO1L6P-201ENST00000603433 1515 ntBASIC16.15■□□□□ 0.18
EBF1Q9UH73 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 MIR4525-201ENST00000580000 75 ntBASIC16.15■□□□□ 0.18
EBF1Q9UH73 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
EBF1Q9UH73 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.15■□□□□ 0.18
EBF1Q9UH73 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
EBF1Q9UH73 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.14■□□□□ 0.18
EBF1Q9UH73 GGT3P-204ENST00000453783 1664 ntBASIC16.14■□□□□ 0.18
EBF1Q9UH73 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
EBF1Q9UH73 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
EBF1Q9UH73 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms