Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COMMD9Q9P000 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
COMMD9Q9P000 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.6□□□□□ -0.23
COMMD9Q9P000 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 PAWRP1-201ENST00000451083 565 ntBASIC13.6□□□□□ -0.23
COMMD9Q9P000 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 AC091167.2-201ENST00000579581 588 ntBASIC13.6□□□□□ -0.23
COMMD9Q9P000 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 AC138894.3-201ENST00000603787 634 ntBASIC13.6□□□□□ -0.23
COMMD9Q9P000 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.6□□□□□ -0.23
COMMD9Q9P000 AC091076.1-201ENST00000610741 619 ntBASIC13.6□□□□□ -0.23
COMMD9Q9P000 AC092119.3-201ENST00000612618 583 ntBASIC13.6□□□□□ -0.23
COMMD9Q9P000 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
COMMD9Q9P000 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
COMMD9Q9P000 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
COMMD9Q9P000 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 FAM210CP-201ENST00000445714 574 ntBASIC13.59□□□□□ -0.23
COMMD9Q9P000 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 MPDU1-223ENST00000582151 728 ntBASIC13.59□□□□□ -0.23
COMMD9Q9P000 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.59□□□□□ -0.23
COMMD9Q9P000 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.59□□□□□ -0.23
COMMD9Q9P000 AF228730.7-201ENST00000641842 219 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms