Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAPH1Q70E73 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAPH1Q70E73 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.02■□□□□ 0.15
RAPH1Q70E73 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RAPH1Q70E73 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAPH1Q70E73 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.02■□□□□ 0.15
RAPH1Q70E73 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAPH1Q70E73 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAPH1Q70E73 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.02■□□□□ 0.15
RAPH1Q70E73 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAPH1Q70E73 TCAF2P1-201ENST00000291129 2421 ntBASIC16.02■□□□□ 0.15
RAPH1Q70E73 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 AC002056.1-201ENST00000395613 760 ntBASIC16.01■□□□□ 0.15
RAPH1Q70E73 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 KRT18P2-201ENST00000447938 1258 ntBASIC16.01■□□□□ 0.15
RAPH1Q70E73 AC074386.1-202ENST00000463561 864 ntBASIC16.01■□□□□ 0.15
RAPH1Q70E73 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.01■□□□□ 0.15
RAPH1Q70E73 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAPH1Q70E73 AC034105.1-201ENST00000563488 319 ntBASIC16.01■□□□□ 0.15
RAPH1Q70E73 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.01■□□□□ 0.15
RAPH1Q70E73 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAPH1Q70E73 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
RAPH1Q70E73 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.01■□□□□ 0.15
RAPH1Q70E73 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.01■□□□□ 0.15
RAPH1Q70E73 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAPH1Q70E73 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.01■□□□□ 0.15
RAPH1Q70E73 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.01■□□□□ 0.15
RAPH1Q70E73 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.01■□□□□ 0.15
RAPH1Q70E73 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.01■□□□□ 0.15
RAPH1Q70E73 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.01■□□□□ 0.15
RAPH1Q70E73 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAPH1Q70E73 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RAPH1Q70E73 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16■□□□□ 0.15
RAPH1Q70E73 TMBIM7P-203ENST00000641617 1718 ntBASIC16■□□□□ 0.15
RAPH1Q70E73 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16■□□□□ 0.15
RAPH1Q70E73 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16■□□□□ 0.15
RAPH1Q70E73 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16■□□□□ 0.15
RAPH1Q70E73 AC145285.3-201ENST00000564603 959 ntBASIC16■□□□□ 0.15
RAPH1Q70E73 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16■□□□□ 0.15
RAPH1Q70E73 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16■□□□□ 0.15
RAPH1Q70E73 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16■□□□□ 0.15
RAPH1Q70E73 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RAPH1Q70E73 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16■□□□□ 0.15
RAPH1Q70E73 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RAPH1Q70E73 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
RAPH1Q70E73 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAPH1Q70E73 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16■□□□□ 0.15
RAPH1Q70E73 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16■□□□□ 0.15
RAPH1Q70E73 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RAPH1Q70E73 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAPH1Q70E73 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms