Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CXCR4P61073 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CXCR4P61073 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CXCR4P61073 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
CXCR4P61073 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CXCR4P61073 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.49□□□□□ -0.09
CXCR4P61073 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.49□□□□□ -0.09
CXCR4P61073 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.49□□□□□ -0.09
CXCR4P61073 AC005840.4-201ENST00000541242 2494 ntBASIC14.49□□□□□ -0.09
CXCR4P61073 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CXCR4P61073 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 MRPL20P1-201ENST00000400819 433 ntBASIC14.49□□□□□ -0.09
CXCR4P61073 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.49□□□□□ -0.09
CXCR4P61073 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.49□□□□□ -0.09
CXCR4P61073 AL356488.2-201ENST00000602755 427 ntBASIC14.49□□□□□ -0.09
CXCR4P61073 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.49□□□□□ -0.09
CXCR4P61073 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.49□□□□□ -0.09
CXCR4P61073 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.49□□□□□ -0.09
CXCR4P61073 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CXCR4P61073 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CXCR4P61073 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.49□□□□□ -0.09
CXCR4P61073 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.49□□□□□ -0.09
CXCR4P61073 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.49□□□□□ -0.09
CXCR4P61073 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.49□□□□□ -0.09
CXCR4P61073 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.48□□□□□ -0.09
CXCR4P61073 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CXCR4P61073 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.48□□□□□ -0.09
CXCR4P61073 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.48□□□□□ -0.09
CXCR4P61073 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CXCR4P61073 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 PMS2P4-201ENST00000412466 1052 ntBASIC14.48□□□□□ -0.09
CXCR4P61073 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.48□□□□□ -0.09
CXCR4P61073 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.48□□□□□ -0.09
CXCR4P61073 AP002469.2-201ENST00000531724 424 ntBASIC14.48□□□□□ -0.09
CXCR4P61073 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.48□□□□□ -0.09
CXCR4P61073 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.48□□□□□ -0.09
CXCR4P61073 MIR4515-201ENST00000584082 81 ntBASIC14.48□□□□□ -0.09
CXCR4P61073 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.48□□□□□ -0.09
CXCR4P61073 CLEC4GP1-201ENST00000596555 870 ntBASIC14.48□□□□□ -0.09
CXCR4P61073 AC008735.5-201ENST00000623544 497 ntBASIC14.48□□□□□ -0.09
CXCR4P61073 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.48□□□□□ -0.09
CXCR4P61073 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CXCR4P61073 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CXCR4P61073 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CXCR4P61073 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CXCR4P61073 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.48□□□□□ -0.09
CXCR4P61073 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CXCR4P61073 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.48□□□□□ -0.09
CXCR4P61073 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CXCR4P61073 AC006504.5-208ENST00000588784 2401 ntBASIC14.47□□□□□ -0.09
CXCR4P61073 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
CXCR4P61073 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.47□□□□□ -0.09
CXCR4P61073 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CXCR4P61073 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.47□□□□□ -0.09
CXCR4P61073 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.47□□□□□ -0.09
CXCR4P61073 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.47□□□□□ -0.09
CXCR4P61073 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.47□□□□□ -0.09
CXCR4P61073 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CXCR4P61073 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms