Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 AL080243.2-201ENST00000418783 582 ntBASIC16.75■□□□□ 0.27
SNX16P57768 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.75■□□□□ 0.27
SNX16P57768 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.75■□□□□ 0.27
SNX16P57768 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX16P57768 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX16P57768 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.75■□□□□ 0.27
SNX16P57768 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNX16P57768 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNX16P57768 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
SNX16P57768 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SNX16P57768 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX16P57768 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNX16P57768 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX16P57768 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX16P57768 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.75■□□□□ 0.27
SNX16P57768 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX16P57768 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.75■□□□□ 0.27
SNX16P57768 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX16P57768 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.74■□□□□ 0.27
SNX16P57768 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SNX16P57768 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.74■□□□□ 0.27
SNX16P57768 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SNX16P57768 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.74■□□□□ 0.27
SNX16P57768 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
SNX16P57768 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 RN7SL618P-201ENST00000477850 296 ntBASIC16.74■□□□□ 0.27
SNX16P57768 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.74■□□□□ 0.27
SNX16P57768 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.74■□□□□ 0.27
SNX16P57768 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.74■□□□□ 0.27
SNX16P57768 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.74■□□□□ 0.27
SNX16P57768 AL138828.2-201ENST00000615812 383 ntBASIC16.74■□□□□ 0.27
SNX16P57768 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.74■□□□□ 0.27
SNX16P57768 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SNX16P57768 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SNX16P57768 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.74■□□□□ 0.27
SNX16P57768 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX16P57768 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
SNX16P57768 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SNX16P57768 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SNX16P57768 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.73■□□□□ 0.27
SNX16P57768 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
SNX16P57768 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.73■□□□□ 0.27
SNX16P57768 MIR943-201ENST00000401286 94 ntBASIC16.73■□□□□ 0.27
SNX16P57768 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.73■□□□□ 0.27
SNX16P57768 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.73■□□□□ 0.27
SNX16P57768 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.73■□□□□ 0.27
SNX16P57768 MIR4313-201ENST00000580760 101 ntBASIC16.73■□□□□ 0.27
SNX16P57768 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.73■□□□□ 0.27
SNX16P57768 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.73■□□□□ 0.27
SNX16P57768 TEX28P1-201ENST00000613479 1221 ntBASIC16.73■□□□□ 0.27
SNX16P57768 TEX28P2-201ENST00000617764 1221 ntBASIC16.73■□□□□ 0.27
SNX16P57768 SPDYE12P-201ENST00000618416 771 ntBASIC16.73■□□□□ 0.27
SNX16P57768 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SNX16P57768 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.73■□□□□ 0.27
SNX16P57768 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.73■□□□□ 0.27
SNX16P57768 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.73■□□□□ 0.27
SNX16P57768 PRAL-201ENST00000624952 3286 ntBASIC16.73■□□□□ 0.27
SNX16P57768 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.73■□□□□ 0.27
SNX16P57768 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
SNX16P57768 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 PCDHA3-202ENST00000532566 4594 ntBASIC16.73■□□□□ 0.27
SNX16P57768 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX16P57768 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms