Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PBX3P40426 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PBX3P40426 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PBX3P40426 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PBX3P40426 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PBX3P40426 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PBX3P40426 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PBX3P40426 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PBX3P40426 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.83■□□□□ 0.28
PBX3P40426 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PBX3P40426 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.83■□□□□ 0.28
PBX3P40426 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.83■□□□□ 0.28
PBX3P40426 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.83■□□□□ 0.28
PBX3P40426 FAM21FP-201ENST00000426241 1131 ntBASIC16.83■□□□□ 0.28
PBX3P40426 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.83■□□□□ 0.28
PBX3P40426 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PBX3P40426 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.83■□□□□ 0.28
PBX3P40426 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.83■□□□□ 0.28
PBX3P40426 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.83■□□□□ 0.28
PBX3P40426 AC108725.1-201ENST00000495472 409 ntBASIC16.83■□□□□ 0.28
PBX3P40426 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.83■□□□□ 0.28
PBX3P40426 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.83■□□□□ 0.28
PBX3P40426 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.83■□□□□ 0.28
PBX3P40426 AP000812.2-201ENST00000538934 718 ntBASIC16.83■□□□□ 0.28
PBX3P40426 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.83■□□□□ 0.28
PBX3P40426 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.83■□□□□ 0.28
PBX3P40426 AC009486.1-201ENST00000569860 813 ntBASIC16.83■□□□□ 0.28
PBX3P40426 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PBX3P40426 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.83■□□□□ 0.28
PBX3P40426 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.83■□□□□ 0.28
PBX3P40426 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.83■□□□□ 0.28
PBX3P40426 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.83■□□□□ 0.28
PBX3P40426 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PBX3P40426 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
PBX3P40426 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PBX3P40426 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.83■□□□□ 0.28
PBX3P40426 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PBX3P40426 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.82■□□□□ 0.28
PBX3P40426 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.82■□□□□ 0.28
PBX3P40426 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.82■□□□□ 0.28
PBX3P40426 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
PBX3P40426 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PBX3P40426 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.82■□□□□ 0.28
PBX3P40426 KRT8P44-201ENST00000441609 1350 ntBASIC16.82■□□□□ 0.28
PBX3P40426 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 TUBB1P2-201ENST00000422712 1306 ntBASIC16.82■□□□□ 0.28
PBX3P40426 TUBB1P1-201ENST00000503144 1300 ntBASIC16.82■□□□□ 0.28
PBX3P40426 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PBX3P40426 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.82■□□□□ 0.28
PBX3P40426 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.82■□□□□ 0.28
PBX3P40426 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.82■□□□□ 0.28
PBX3P40426 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.82■□□□□ 0.28
PBX3P40426 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 KRT18P43-201ENST00000469825 1281 ntBASIC16.82■□□□□ 0.28
PBX3P40426 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.82■□□□□ 0.28
PBX3P40426 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PBX3P40426 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.82■□□□□ 0.28
PBX3P40426 RNA5SP412-201ENST00000516234 123 ntBASIC16.82■□□□□ 0.28
PBX3P40426 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.82■□□□□ 0.28
PBX3P40426 AP001063.1-201ENST00000568332 529 ntBASIC16.82■□□□□ 0.28
PBX3P40426 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PBX3P40426 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PBX3P40426 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.82■□□□□ 0.28
PBX3P40426 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
PBX3P40426 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.82■□□□□ 0.28
PBX3P40426 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PBX3P40426 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PBX3P40426 AL118508.1-201ENST00000613502 2345 ntBASIC16.81■□□□□ 0.28
PBX3P40426 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PBX3P40426 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PBX3P40426 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PBX3P40426 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.81■□□□□ 0.28
PBX3P40426 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PBX3P40426 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PBX3P40426 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
PBX3P40426 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PBX3P40426 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PBX3P40426 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PBX3P40426 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
PBX3P40426 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PBX3P40426 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PBX3P40426 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.81■□□□□ 0.28
PBX3P40426 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PBX3P40426 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms