Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
TPM3P06753 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM3P06753 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM3P06753 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.86■□□□□ 0.45
TPM3P06753 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.86■□□□□ 0.45
TPM3P06753 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.86■□□□□ 0.45
TPM3P06753 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.86■□□□□ 0.45
TPM3P06753 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.86■□□□□ 0.45
TPM3P06753 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM3P06753 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM3P06753 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM3P06753 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TPM3P06753 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM3P06753 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TPM3P06753 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
TPM3P06753 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.85■□□□□ 0.45
TPM3P06753 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TPM3P06753 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.85■□□□□ 0.45
TPM3P06753 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.85■□□□□ 0.45
TPM3P06753 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.85■□□□□ 0.45
TPM3P06753 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.85■□□□□ 0.45
TPM3P06753 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.85■□□□□ 0.45
TPM3P06753 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.85■□□□□ 0.45
TPM3P06753 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.85■□□□□ 0.45
TPM3P06753 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.85■□□□□ 0.45
TPM3P06753 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TPM3P06753 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TPM3P06753 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM3P06753 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TPM3P06753 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TPM3P06753 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
TPM3P06753 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.84■□□□□ 0.45
TPM3P06753 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TPM3P06753 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TPM3P06753 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.84■□□□□ 0.45
TPM3P06753 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TPM3P06753 AC067750.1-201ENST00000608826 6545 ntBASIC17.84■□□□□ 0.45
TPM3P06753 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TPM3P06753 AC073621.1-201ENST00000392730 636 ntBASIC17.84■□□□□ 0.45
TPM3P06753 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.84■□□□□ 0.45
TPM3P06753 DUSP5P1-201ENST00000441325 1139 ntBASIC17.84■□□□□ 0.45
TPM3P06753 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.84■□□□□ 0.45
TPM3P06753 MIR3652-201ENST00000579335 131 ntBASIC17.84■□□□□ 0.45
TPM3P06753 AC093458.2-201ENST00000623150 629 ntBASIC17.84■□□□□ 0.45
TPM3P06753 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.84■□□□□ 0.45
TPM3P06753 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.84■□□□□ 0.45
TPM3P06753 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
TPM3P06753 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.84■□□□□ 0.45
TPM3P06753 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.84■□□□□ 0.45
TPM3P06753 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TPM3P06753 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TPM3P06753 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM3P06753 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TPM3P06753 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TPM3P06753 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.83■□□□□ 0.45
TPM3P06753 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TPM3P06753 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TPM3P06753 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
TPM3P06753 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TPM3P06753 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TPM3P06753 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
TPM3P06753 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms