Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.95■□□□□ 0.14
APOA4P06727 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.95■□□□□ 0.14
APOA4P06727 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.95■□□□□ 0.14
APOA4P06727 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.95■□□□□ 0.14
APOA4P06727 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.95■□□□□ 0.14
APOA4P06727 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
APOA4P06727 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
APOA4P06727 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
APOA4P06727 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.94■□□□□ 0.14
APOA4P06727 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.94■□□□□ 0.14
APOA4P06727 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
APOA4P06727 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.94■□□□□ 0.14
APOA4P06727 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.94■□□□□ 0.14
APOA4P06727 AC023141.5-201ENST00000458585 616 ntBASIC15.94■□□□□ 0.14
APOA4P06727 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
APOA4P06727 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
APOA4P06727 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
APOA4P06727 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.94■□□□□ 0.14
APOA4P06727 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.94■□□□□ 0.14
APOA4P06727 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
APOA4P06727 AC061975.2-201ENST00000581722 295 ntBASIC15.94■□□□□ 0.14
APOA4P06727 AL596442.2-201ENST00000610240 980 ntBASIC15.94■□□□□ 0.14
APOA4P06727 AL691403.2-201ENST00000618460 490 ntBASIC15.94■□□□□ 0.14
APOA4P06727 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
APOA4P06727 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
APOA4P06727 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
APOA4P06727 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.94■□□□□ 0.14
APOA4P06727 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.94■□□□□ 0.14
APOA4P06727 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
APOA4P06727 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.94■□□□□ 0.14
APOA4P06727 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
APOA4P06727 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOA4P06727 CICP13-201ENST00000422015 2789 ntBASIC15.93■□□□□ 0.14
APOA4P06727 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
APOA4P06727 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.93■□□□□ 0.14
APOA4P06727 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.93■□□□□ 0.14
APOA4P06727 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
APOA4P06727 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.93■□□□□ 0.14
APOA4P06727 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
APOA4P06727 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOA4P06727 AP3S2-216ENST00000617003 1561 ntBASIC15.93■□□□□ 0.14
APOA4P06727 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.93■□□□□ 0.14
APOA4P06727 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
APOA4P06727 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
APOA4P06727 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
APOA4P06727 RPS8P6-201ENST00000426177 609 ntBASIC15.93■□□□□ 0.14
APOA4P06727 DNAJB3-202ENST00000449667 1266 ntBASIC15.93■□□□□ 0.14
APOA4P06727 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.93■□□□□ 0.14
APOA4P06727 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.93■□□□□ 0.14
APOA4P06727 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOA4P06727 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.93■□□□□ 0.14
APOA4P06727 ALG1L8P-201ENST00000533887 760 ntBASIC15.93■□□□□ 0.14
APOA4P06727 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.93■□□□□ 0.14
APOA4P06727 AC093520.2-201ENST00000561830 333 ntBASIC15.93■□□□□ 0.14
APOA4P06727 RARRES2P9-201ENST00000565168 469 ntBASIC15.93■□□□□ 0.14
APOA4P06727 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.93■□□□□ 0.14
APOA4P06727 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.93■□□□□ 0.14
APOA4P06727 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.93■□□□□ 0.14
APOA4P06727 AC009093.7-201ENST00000623853 1223 ntBASIC15.93■□□□□ 0.14
APOA4P06727 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.93■□□□□ 0.14
APOA4P06727 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.93■□□□□ 0.14
APOA4P06727 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOA4P06727 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
APOA4P06727 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOA4P06727 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.93■□□□□ 0.14
APOA4P06727 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
APOA4P06727 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
APOA4P06727 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms