Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRBC1P01850 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.86■□□□□ 0.13
TRBC1P01850 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBC1P01850 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.86■□□□□ 0.13
TRBC1P01850 SPDYE18-201ENST00000510091 1050 ntBASIC15.86■□□□□ 0.13
TRBC1P01850 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.86■□□□□ 0.13
TRBC1P01850 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRBC1P01850 AC092337.1-201ENST00000568699 1129 ntBASIC15.86■□□□□ 0.13
TRBC1P01850 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.86■□□□□ 0.13
TRBC1P01850 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.86■□□□□ 0.13
TRBC1P01850 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TRBC1P01850 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.86■□□□□ 0.13
TRBC1P01850 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
TRBC1P01850 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.86■□□□□ 0.13
TRBC1P01850 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBC1P01850 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBC1P01850 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBC1P01850 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
TRBC1P01850 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBC1P01850 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBC1P01850 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
TRBC1P01850 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRBC1P01850 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.85■□□□□ 0.13
TRBC1P01850 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 MIR661-201ENST00000384842 89 ntBASIC15.85■□□□□ 0.13
TRBC1P01850 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRBC1P01850 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.85■□□□□ 0.13
TRBC1P01850 FAM207CP-201ENST00000443486 507 ntBASIC15.85■□□□□ 0.13
TRBC1P01850 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 SLED1-202ENST00000512051 380 ntBASIC15.85■□□□□ 0.13
TRBC1P01850 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBC1P01850 AC104794.3-201ENST00000566840 1248 ntBASIC15.85■□□□□ 0.13
TRBC1P01850 MIR4745-201ENST00000577608 62 ntBASIC15.85■□□□□ 0.13
TRBC1P01850 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBC1P01850 SRD5A3P1-201ENST00000603021 949 ntBASIC15.85■□□□□ 0.13
TRBC1P01850 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.85■□□□□ 0.13
TRBC1P01850 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.85■□□□□ 0.13
TRBC1P01850 AC009118.2-201ENST00000613275 655 ntBASIC15.85■□□□□ 0.13
TRBC1P01850 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.85■□□□□ 0.13
TRBC1P01850 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.85■□□□□ 0.13
TRBC1P01850 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBC1P01850 AF228730.6-201ENST00000641497 218 ntBASIC15.85■□□□□ 0.13
TRBC1P01850 AC084121.3-201ENST00000641716 218 ntBASIC15.85■□□□□ 0.13
TRBC1P01850 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRBC1P01850 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBC1P01850 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBC1P01850 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBC1P01850 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBC1P01850 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRBC1P01850 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBC1P01850 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBC1P01850 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
TRBC1P01850 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.84■□□□□ 0.13
TRBC1P01850 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBC1P01850 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBC1P01850 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBC1P01850 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBC1P01850 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBC1P01850 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRBC1P01850 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRBC1P01850 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRBC1P01850 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBC1P01850 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBC1P01850 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBC1P01850 AC015922.1-201ENST00000421102 1152 ntBASIC15.84■□□□□ 0.13
TRBC1P01850 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBC1P01850 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.84■□□□□ 0.13
TRBC1P01850 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBC1P01850 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.84■□□□□ 0.13
TRBC1P01850 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRBC1P01850 SERBP1P5-201ENST00000510079 1181 ntBASIC15.84■□□□□ 0.13
TRBC1P01850 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms