Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AP000346.4-201ENST00000614827 381 ntBASIC17.83■□□□□ 0.44
ALDH1A1P00352 PRSS30P-206ENST00000641773 873 ntBASIC17.83■□□□□ 0.44
ALDH1A1P00352 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ALDH1A1P00352 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ALDH1A1P00352 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ALDH1A1P00352 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ALDH1A1P00352 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ALDH1A1P00352 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ALDH1A1P00352 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ALDH1A1P00352 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ALDH1A1P00352 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ALDH1A1P00352 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 AC060834.1-201ENST00000443027 2032 ntBASIC17.82■□□□□ 0.44
ALDH1A1P00352 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 DPM3-202ENST00000368399 517 ntBASIC17.82■□□□□ 0.44
ALDH1A1P00352 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.82■□□□□ 0.44
ALDH1A1P00352 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ALDH1A1P00352 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 AC013355.1-201ENST00000562625 723 ntBASIC17.81■□□□□ 0.44
ALDH1A1P00352 AC005730.2-201ENST00000564549 1184 ntBASIC17.81■□□□□ 0.44
ALDH1A1P00352 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 COX6A1P2-201ENST00000620597 330 ntBASIC17.81■□□□□ 0.44
ALDH1A1P00352 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.81■□□□□ 0.44
ALDH1A1P00352 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ALDH1A1P00352 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms