Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC073347.1-201ENST00000421633 2643 ntBASIC14.61□□□□□ -0.07
NKX2-2O95096 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NKX2-2O95096 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
NKX2-2O95096 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NKX2-2O95096 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
NKX2-2O95096 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.6□□□□□ -0.07
NKX2-2O95096 MIR943-201ENST00000401286 94 ntBASIC14.6□□□□□ -0.07
NKX2-2O95096 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.6□□□□□ -0.07
NKX2-2O95096 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.6□□□□□ -0.07
NKX2-2O95096 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.6□□□□□ -0.07
NKX2-2O95096 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.6□□□□□ -0.07
NKX2-2O95096 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
NKX2-2O95096 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.6□□□□□ -0.07
NKX2-2O95096 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 ZNF890P-202ENST00000530367 1156 ntBASIC14.6□□□□□ -0.07
NKX2-2O95096 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.6□□□□□ -0.07
NKX2-2O95096 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 AL844908.2-201ENST00000609461 460 ntBASIC14.6□□□□□ -0.07
NKX2-2O95096 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
NKX2-2O95096 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX2-2O95096 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX2-2O95096 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX2-2O95096 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.6□□□□□ -0.07
NKX2-2O95096 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.6□□□□□ -0.07
NKX2-2O95096 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NKX2-2O95096 AC013268.4-201ENST00000637413 2228 ntBASIC14.6□□□□□ -0.07
NKX2-2O95096 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NKX2-2O95096 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX2-2O95096 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
NKX2-2O95096 AC100757.3-201ENST00000622361 1406 ntBASIC14.59□□□□□ -0.07
NKX2-2O95096 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NKX2-2O95096 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.59□□□□□ -0.07
NKX2-2O95096 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX2-2O95096 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
NKX2-2O95096 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX2-2O95096 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.59□□□□□ -0.07
NKX2-2O95096 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX2-2O95096 SLED1-202ENST00000512051 380 ntBASIC14.59□□□□□ -0.07
NKX2-2O95096 SDHAP3-202ENST00000515467 728 ntBASIC14.59□□□□□ -0.07
NKX2-2O95096 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.59□□□□□ -0.07
NKX2-2O95096 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NKX2-2O95096 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.59□□□□□ -0.07
NKX2-2O95096 DUX4L27-201ENST00000554796 1261 ntBASIC14.59□□□□□ -0.07
NKX2-2O95096 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms