Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 AC119751.2-201ENST00000504529 210 ntBASIC15.75■□□□□ 0.11
PCDHGA12O60330 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 MIR4259-201ENST00000584466 101 ntBASIC15.75■□□□□ 0.11
PCDHGA12O60330 AC133552.6-201ENST00000613406 534 ntBASIC15.75■□□□□ 0.11
PCDHGA12O60330 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.75■□□□□ 0.11
PCDHGA12O60330 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.75■□□□□ 0.11
PCDHGA12O60330 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCDHGA12O60330 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 AC024909.3-201ENST00000611513 2257 ntBASIC15.74■□□□□ 0.11
PCDHGA12O60330 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 KRT223P-202ENST00000449164 1292 ntBASIC15.74■□□□□ 0.11
PCDHGA12O60330 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 AC008735.3-201ENST00000596646 500 ntBASIC15.74■□□□□ 0.11
PCDHGA12O60330 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 AL365330.1-201ENST00000607459 531 ntBASIC15.74■□□□□ 0.11
PCDHGA12O60330 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGA12O60330 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGA12O60330 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 AC092552.1-201ENST00000547243 906 ntBASIC15.73■□□□□ 0.11
PCDHGA12O60330 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 AL033527.4-201ENST00000641026 673 ntBASIC15.73■□□□□ 0.11
PCDHGA12O60330 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGA12O60330 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGA12O60330 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms