Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TLR4O00206 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TLR4O00206 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TLR4O00206 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TLR4O00206 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TLR4O00206 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.71■□□□□ 0.1
TLR4O00206 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
TLR4O00206 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.7■□□□□ 0.1
TLR4O00206 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
TLR4O00206 AL513523.2-202ENST00000427283 2040 ntBASIC15.7■□□□□ 0.1
TLR4O00206 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.7■□□□□ 0.1
TLR4O00206 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TLR4O00206 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.7■□□□□ 0.1
TLR4O00206 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TLR4O00206 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TLR4O00206 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.7■□□□□ 0.1
TLR4O00206 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.7■□□□□ 0.1
TLR4O00206 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.7■□□□□ 0.1
TLR4O00206 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.7■□□□□ 0.1
TLR4O00206 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.7■□□□□ 0.1
TLR4O00206 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.7■□□□□ 0.1
TLR4O00206 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TLR4O00206 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.7■□□□□ 0.1
TLR4O00206 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.7■□□□□ 0.1
TLR4O00206 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.7■□□□□ 0.1
TLR4O00206 AC010319.3-201ENST00000597028 470 ntBASIC15.7■□□□□ 0.1
TLR4O00206 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.7■□□□□ 0.1
TLR4O00206 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.7■□□□□ 0.1
TLR4O00206 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.7■□□□□ 0.1
TLR4O00206 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 BNIP3P1-202ENST00000550043 1585 ntBASIC15.7■□□□□ 0.1
TLR4O00206 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TLR4O00206 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TLR4O00206 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TLR4O00206 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.69■□□□□ 0.1
TLR4O00206 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
TLR4O00206 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.69■□□□□ 0.1
TLR4O00206 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.69■□□□□ 0.1
TLR4O00206 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
TLR4O00206 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.69■□□□□ 0.1
TLR4O00206 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.69■□□□□ 0.1
TLR4O00206 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TLR4O00206 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.69■□□□□ 0.1
TLR4O00206 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TLR4O00206 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.69■□□□□ 0.1
TLR4O00206 TARDBPP1-201ENST00000442013 1203 ntBASIC15.69■□□□□ 0.1
TLR4O00206 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.69■□□□□ 0.1
TLR4O00206 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.69■□□□□ 0.1
TLR4O00206 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.69■□□□□ 0.1
TLR4O00206 AL158212.4-201ENST00000624062 1286 ntBASIC15.69■□□□□ 0.1
TLR4O00206 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
TLR4O00206 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.69■□□□□ 0.1
TLR4O00206 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TLR4O00206 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.69■□□□□ 0.1
TLR4O00206 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
TLR4O00206 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.69■□□□□ 0.1
TLR4O00206 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TLR4O00206 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
TLR4O00206 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.69■□□□□ 0.1
TLR4O00206 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TLR4O00206 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.68■□□□□ 0.1
TLR4O00206 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TLR4O00206 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TLR4O00206 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.68■□□□□ 0.1
TLR4O00206 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.68■□□□□ 0.1
TLR4O00206 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms