Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
CHKB-CPT1BH3BT56 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 PTCH1-205ENST00000418258 7815 ntTSL 5 BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 AL359881.3-201ENST00000602640 1721 ntBASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC8.77□□□□□ -1
CHKB-CPT1BH3BT56 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 TNC-201ENST00000341037 6786 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 AL023284.2-201ENST00000405850 579 ntBASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 POM121L13P-201ENST00000422362 380 ntBASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 PTPA-216ENST00000432651 857 ntTSL 2 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 SPI1-203ENST00000533030 661 ntTSL 2 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 NAT14-202ENST00000587400 416 ntTSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 AC140479.7-201ENST00000636301 2332 ntBASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 KANSL1-201ENST00000262419 5309 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 FTO-214ENST00000636218 2227 ntTSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 STX16-202ENST00000355957 4897 ntTSL 2 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC8.77□□□□□ -1.01
CHKB-CPT1BH3BT56 PTGR2-205ENST00000555661 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms