Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
AP4B1Q9Y6B7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 SLC25A6P2-201ENST00000497974 877 ntBASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 CICP14-201ENST00000629111 2732 ntBASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
AP4B1Q9Y6B7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.33■□□□□ 0.05
AP4B1Q9Y6B7 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 POLD2P1-201ENST00000511220 997 ntBASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 AC096734.2-201ENST00000562054 433 ntBASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP4B1Q9Y6B7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms