Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 AC010328.2-201ENST00000597698 1111 ntBASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 AC008687.7-202ENST00000637404 953 ntBASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HOXC10Q9NYD6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.02■□□□□ 0.47
HOXC10Q9NYD6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.02■□□□□ 0.47
HOXC10Q9NYD6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.02■□□□□ 0.47
HOXC10Q9NYD6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
HOXC10Q9NYD6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HOXC10Q9NYD6 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.02■□□□□ 0.47
HOXC10Q9NYD6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
HOXC10Q9NYD6 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HOXC10Q9NYD6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HOXC10Q9NYD6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HOXC10Q9NYD6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 CROCCP1-201ENST00000426910 5675 ntBASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 AC026954.1-201ENST00000429771 1293 ntBASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 PFN1P12-201ENST00000455938 534 ntBASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 KRT90P-201ENST00000549264 1064 ntBASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 DUX4L45-201ENST00000566406 1057 ntBASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 GNRHR2-203ENST00000581100 1187 ntBASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.01■□□□□ 0.47
HOXC10Q9NYD6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18■□□□□ 0.47
HOXC10Q9NYD6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18■□□□□ 0.47
HOXC10Q9NYD6 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 AL138799.1-201ENST00000448213 1675 ntBASIC18■□□□□ 0.47
HOXC10Q9NYD6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18■□□□□ 0.47
HOXC10Q9NYD6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18■□□□□ 0.47
HOXC10Q9NYD6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 KRT18P25-201ENST00000508931 1278 ntBASIC18■□□□□ 0.47
HOXC10Q9NYD6 AGER-214ENST00000538695 487 ntTSL 2 BASIC18■□□□□ 0.47
HOXC10Q9NYD6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18■□□□□ 0.47
HOXC10Q9NYD6 AC023310.1-201ENST00000554836 735 ntBASIC18■□□□□ 0.47
HOXC10Q9NYD6 AC025279.2-201ENST00000569730 653 ntBASIC18■□□□□ 0.47
HOXC10Q9NYD6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18■□□□□ 0.47
HOXC10Q9NYD6 MIR6787-201ENST00000616675 61 ntBASIC18■□□□□ 0.47
HOXC10Q9NYD6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 AC132938.4-201ENST00000623835 848 ntBASIC18■□□□□ 0.47
HOXC10Q9NYD6 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18■□□□□ 0.47
HOXC10Q9NYD6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18■□□□□ 0.47
HOXC10Q9NYD6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18■□□□□ 0.47
HOXC10Q9NYD6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18■□□□□ 0.47
HOXC10Q9NYD6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HOXC10Q9NYD6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms