Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.822e-7■□□□□ 9
XRN2Q9H0D6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.11■□□□□ 0.812e-7■□□□□ 9
XRN2Q9H0D6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.08■□□□□ 0.818e-6■□□□□ 9
XRN2Q9H0D6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.1■□□□□ 0.658e-6■□□□□ 9
XRN2Q9H0D6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.94■□□□□ 0.628e-6■□□□□ 9
XRN2Q9H0D6 FOXP1-219ENST00000610810 577 ntTSL 518.37■□□□□ 0.538e-6■□□□□ 9
XRN2Q9H0D6 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.178e-6■□□□□ 9
XRN2Q9H0D6 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.98■□□□□ 0.158e-6■□□□□ 9
XRN2Q9H0D6 DLGAP4-210ENST00000479951 631 ntTSL 315.91■□□□□ 0.148e-6■□□□□ 9
XRN2Q9H0D6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.48■□□□□ 0.078e-6■□□□□ 9
XRN2Q9H0D6 INTS1-206ENST00000493446 675 ntTSL 315.02■□□□□ -08e-6■□□□□ 9
XRN2Q9H0D6 DLGAP4-209ENST00000479220 577 ntTSL 314.69□□□□□ -0.068e-6■□□□□ 9
XRN2Q9H0D6 CHPF2-202ENST00000465601 782 ntTSL 314.33□□□□□ -0.128e-6■□□□□ 9
XRN2Q9H0D6 INTS1-205ENST00000483196 386 ntTSL 512.61□□□□□ -0.398e-6■□□□□ 9
XRN2Q9H0D6 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.42□□□□□ -0.428e-6■□□□□ 9
XRN2Q9H0D6 CHPF2-201ENST00000035307 3978 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.428e-6■□□□□ 9
XRN2Q9H0D6 FOXP1-216ENST00000497553 530 ntTSL 412.35□□□□□ -0.438e-6■□□□□ 9
XRN2Q9H0D6 LPCAT1-205ENST00000513757 547 ntTSL 412.1□□□□□ -0.472e-7■□□□□ 9
XRN2Q9H0D6 FOXP1-205ENST00000468577 1842 ntTSL 5 BASIC11.82□□□□□ -0.528e-6■□□□□ 9
XRN2Q9H0D6 DLGAP4-213ENST00000489701 2396 ntTSL 2 BASIC11.13□□□□□ -0.638e-6■□□□□ 9
XRN2Q9H0D6 FOXP1-220ENST00000614176 6384 ntAPPRIS ALT1 TSL 2 BASIC10.1□□□□□ -0.798e-6■□□□□ 9
XRN2Q9H0D6 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.918e-6■□□□□ 9
XRN2Q9H0D6 MIR191-201ENST00000384873 92 ntBASIC8.51□□□□□ -1.058e-6■□□□□ 9
XRN2Q9H0D6 FOXP1-215ENST00000497355 1778 ntTSL 1 (best)7.69□□□□□ -1.188e-6■□□□□ 9
XRN2Q9H0D6 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.79□□□□□ -1.328e-6■□□□□ 9
XRN2Q9H0D6 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.398e-6■□□□□ 9
XRN2Q9H0D6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.548e-6■□□□□ 9
XRN2Q9H0D6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.11□□□□□ -1.598e-6■□□□□ 9
XRN2Q9H0D6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.071e-6■□□□□ 9
XRN2Q9H0D6 DDAH2-214ENST00000416410 887 ntTSL 224.3■■□□□ 1.481e-6■□□□□ 9
XRN2Q9H0D6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.311e-6■□□□□ 9
XRN2Q9H0D6 DDAH2-215ENST00000436437 882 ntTSL 323.03■■□□□ 1.281e-6■□□□□ 9
XRN2Q9H0D6 GDF15-203ENST00000595973 890 ntTSL 522.74■■□□□ 1.231e-6■□□□□ 9
XRN2Q9H0D6 DDAH2-217ENST00000469963 1682 ntTSL 522.48■■□□□ 1.191e-6■□□□□ 9
XRN2Q9H0D6 PKN1-205ENST00000586039 686 ntTSL 219.76■□□□□ 0.751e-6■□□□□ 9
XRN2Q9H0D6 PKN1-204ENST00000585839 3518 ntTSL 218.21■□□□□ 0.511e-6■□□□□ 9
XRN2Q9H0D6 GDF15-202ENST00000594925 294 ntTSL 318.17■□□□□ 0.51e-6■□□□□ 9
XRN2Q9H0D6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.491e-6■□□□□ 9
XRN2Q9H0D6 PKN1-206ENST00000586237 529 ntTSL 517.25■□□□□ 0.351e-6■□□□□ 9
XRN2Q9H0D6 PKN1-213ENST00000591461 867 ntTSL 317.16■□□□□ 0.341e-6■□□□□ 9
XRN2Q9H0D6 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.77■□□□□ 0.281e-6■□□□□ 9
XRN2Q9H0D6 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC15.17■□□□□ 0.021e-6■□□□□ 9
XRN2Q9H0D6 ZCCHC7-203ENST00000461038 2793 ntTSL 1 (best)14.67□□□□□ -0.061e-6■□□□□ 9
XRN2Q9H0D6 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.121e-6■□□□□ 9
XRN2Q9H0D6 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.9□□□□□ -0.181e-6■□□□□ 9
XRN2Q9H0D6 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.851e-6■□□□□ 9
XRN2Q9H0D6 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.211e-6■□□□□ 9
XRN2Q9H0D6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.651e-6■□□□□ 9
XRN2Q9H0D6 VDAC3-212ENST00000524291 533 ntTSL 23.29□□□□□ -1.881e-6■□□□□ 9
XRN2Q9H0D6 AC022167.2-201ENST00000565934 2288 ntTSL 3 BASIC11.83□□□□□ -0.523e-8■□□□□ 9
XRN2Q9H0D6 RBCK1-208ENST00000414880 765 ntTSL 316.87■□□□□ 0.291e-8■□□□□ 9
XRN2Q9H0D6 PRR14-207ENST00000565410 600 ntTSL 224.69■■□□□ 1.544e-7■□□□□ 9
XRN2Q9H0D6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.464e-7■□□□□ 9
XRN2Q9H0D6 PRR14-205ENST00000563399 554 ntTSL 422.34■■□□□ 1.174e-7■□□□□ 9
XRN2Q9H0D6 HMBS-226ENST00000640813 1283 ntTSL 522.15■■□□□ 1.144e-7■□□□□ 9
XRN2Q9H0D6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.98■■□□□ 1.114e-7■□□□□ 9
XRN2Q9H0D6 HMBS-212ENST00000542044 1544 ntTSL 521.9■■□□□ 1.14e-7■□□□□ 9
XRN2Q9H0D6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.75■■□□□ 1.074e-7■□□□□ 9
XRN2Q9H0D6 GPAA1-218ENST00000534072 1090 ntTSL 220.89■□□□□ 0.934e-7■□□□□ 9
XRN2Q9H0D6 PRR14-211ENST00000568754 856 ntTSL 320.84■□□□□ 0.934e-7■□□□□ 9
XRN2Q9H0D6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.814e-7■□□□□ 9
XRN2Q9H0D6 GPAA1-216ENST00000531593 543 ntTSL 319.78■□□□□ 0.764e-7■□□□□ 9
XRN2Q9H0D6 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.754e-7■□□□□ 9
XRN2Q9H0D6 GPAA1-212ENST00000529638 1570 ntTSL 519.61■□□□□ 0.734e-7■□□□□ 9
XRN2Q9H0D6 PRR14-206ENST00000564946 2117 ntTSL 219.07■□□□□ 0.644e-7■□□□□ 9
XRN2Q9H0D6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.77■□□□□ 0.64e-7■□□□□ 9
XRN2Q9H0D6 HMBS-222ENST00000545621 1282 ntTSL 1 (best)18.64■□□□□ 0.574e-7■□□□□ 9
XRN2Q9H0D6 PRR14-212ENST00000569864 528 ntTSL 318.52■□□□□ 0.564e-7■□□□□ 9
XRN2Q9H0D6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.97■□□□□ 0.474e-7■□□□□ 9
XRN2Q9H0D6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.95■□□□□ 0.464e-7■□□□□ 9
XRN2Q9H0D6 PRR14-204ENST00000563211 786 ntTSL 517.74■□□□□ 0.434e-7■□□□□ 9
XRN2Q9H0D6 PRR14-201ENST00000287463 2124 ntTSL 217.71■□□□□ 0.424e-7■□□□□ 9
XRN2Q9H0D6 GPAA1-215ENST00000530796 936 ntTSL 315.28■□□□□ 0.044e-7■□□□□ 9
XRN2Q9H0D6 HMBS-224ENST00000546226 2112 ntTSL 214.93□□□□□ -0.024e-7■□□□□ 9
XRN2Q9H0D6 HMBS-219ENST00000544182 1542 ntTSL 214.53□□□□□ -0.084e-7■□□□□ 9
XRN2Q9H0D6 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC14.23□□□□□ -0.134e-7■□□□□ 9
XRN2Q9H0D6 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.42□□□□□ -0.264e-7■□□□□ 9
XRN2Q9H0D6 HMBS-217ENST00000543543 1796 ntTSL 511.69□□□□□ -0.544e-7■□□□□ 9
XRN2Q9H0D6 EIF3I-204ENST00000474371 643 ntTSL 37.84□□□□□ -1.154e-7■□□□□ 9
XRN2Q9H0D6 UBAC1-203ENST00000471163 838 ntTSL 319.42■□□□□ 0.74e-9■□□□□ 9
XRN2Q9H0D6 SCARNA2-201ENST00000458748 420 ntBASIC20.77■□□□□ 0.921e-323■□□□□ 9
XRN2Q9H0D6 AL356488.2-201ENST00000602755 427 ntBASIC20.7■□□□□ 0.91e-323■□□□□ 9
XRN2Q9H0D6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.172e-10■□□□□ 8.9
XRN2Q9H0D6 GDI1-211ENST00000481304 1014 ntTSL 1 (best)19.97■□□□□ 0.792e-10■□□□□ 8.9
XRN2Q9H0D6 GDI1-208ENST00000471972 534 ntTSL 214.42□□□□□ -0.12e-10■□□□□ 8.9
XRN2Q9H0D6 GDI1-213ENST00000489589 918 ntTSL 214.18□□□□□ -0.142e-10■□□□□ 8.9
XRN2Q9H0D6 GDI1-214ENST00000491154 4069 ntTSL 29.94□□□□□ -0.822e-10■□□□□ 8.9
XRN2Q9H0D6 EFHC1-204ENST00000491749 496 ntTSL 429.07■■■□□ 2.243e-6■□□□□ 8.9
XRN2Q9H0D6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.34■■□□□ 1.013e-6■□□□□ 8.9
XRN2Q9H0D6 EFHC1-235ENST00000637849 2746 ntTSL 517.01■□□□□ 0.313e-6■□□□□ 8.9
XRN2Q9H0D6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.62■□□□□ 0.093e-6■□□□□ 8.9
XRN2Q9H0D6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.093e-6■□□□□ 8.9
XRN2Q9H0D6 PAQR8-203ENST00000512121 582 ntTSL 315.04■□□□□ -03e-6■□□□□ 8.9
XRN2Q9H0D6 PAQR8-201ENST00000360726 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.663e-6■□□□□ 8.9
XRN2Q9H0D6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.673e-6■□□□□ 8.9
XRN2Q9H0D6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.477e-8■□□□□ 8.9
XRN2Q9H0D6 SPN-205ENST00000563039 1853 ntTSL 521.3■■□□□ 17e-8■□□□□ 8.9
XRN2Q9H0D6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.077e-8■□□□□ 8.9
XRN2Q9H0D6 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.063e-9■□□□□ 8.9
XRN2Q9H0D6 TUBA1B-203ENST00000547476 584 ntTSL 414.79□□□□□ -0.043e-9■□□□□ 8.9
Retrieved 100 of 21,068 protein–RNA pairs in 476.2 ms