RNA–Protein interactions for RNA: ENST00000524291.1

VDAC3-212, Transcript of voltage dependent anion channel 3, humanhuman

TSL 2

Gene VDAC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-212ENST00000524291 AEBP2Q6ZN18 517 aaPredicted RBP29.52■■■□□ 2.32
VDAC3-212ENST00000524291 CHIC1Q5VXU3 224 aa27.83■■■□□ 2.05
VDAC3-212ENST00000524291 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
VDAC3-212ENST00000524291 PHF23Q9BUL5 403 aaPredicted RBP24.91■■□□□ 1.58
VDAC3-212ENST00000524291 FOXD1Q16676 465 aa23.56■■□□□ 1.36
VDAC3-212ENST00000524291 MSH5O43196 834 aa22.19■■□□□ 1.14
VDAC3-212ENST00000524291 PLPPR3Q6T4P5 718 aa22.16■■□□□ 1.14
VDAC3-212ENST00000524291 POTEDQ86YR6 584 aa22.04■■□□□ 1.12
VDAC3-212ENST00000524291 PIAS4Q8N2W9 510 aaPredicted RBP22■■□□□ 1.11
VDAC3-212ENST00000524291 PPP6R1Q9UPN7 881 aa21.82■■□□□ 1.08
VDAC3-212ENST00000524291 ADRA2BP18089 450 aa21.77■■□□□ 1.08
VDAC3-212ENST00000524291 MAPK8IP2Q13387 824 aaPredicted RBP20.06■□□□□ 0.8
VDAC3-212ENST00000524291 DMRT2Q9Y5R5 561 aa19.99■□□□□ 0.79
VDAC3-212ENST00000524291 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
VDAC3-212ENST00000524291 PPP4R3CPQ6ZMV5 832 aa19.38■□□□□ 0.69
VDAC3-212ENST00000524291 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
VDAC3-212ENST00000524291 CACNB1Q02641 598 aaPredicted RBP19.21■□□□□ 0.67
VDAC3-212ENST00000524291 HOXD11P31277 338 aaPredicted RBP19.14■□□□□ 0.65
VDAC3-212ENST00000524291 CNKSR2Q8WXI2 1034 aa19.08■□□□□ 0.64
VDAC3-212ENST00000524291 RNF216Q9NWF9 866 aaPredicted RBP18.95■□□□□ 0.62
VDAC3-212ENST00000524291 RNF39Q9H2S5 420 aa18.87■□□□□ 0.61
VDAC3-212ENST00000524291 C1QBPQ07021 282 aaKnown RBP18.61■□□□□ 0.57
VDAC3-212ENST00000524291 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
VDAC3-212ENST00000524291 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
VDAC3-212ENST00000524291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.522e-7■□□□□ 8.1
VDAC3-212ENST00000524291 NPM3O75607 178 aaKnown RBP18.28■□□□□ 0.52
VDAC3-212ENST00000524291 U3KPZ7 1027 aaPredicted RBP17.84■□□□□ 0.45
VDAC3-212ENST00000524291 KCNA4P22459 653 aa17.71■□□□□ 0.43
VDAC3-212ENST00000524291 CAPN15O75808 1086 aa17.7■□□□□ 0.42
VDAC3-212ENST00000524291 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
VDAC3-212ENST00000524291 DSG3P32926 999 aa17.6■□□□□ 0.41
VDAC3-212ENST00000524291 SLC4A2P04920 1241 aa17.5■□□□□ 0.39
VDAC3-212ENST00000524291 APLP2Q06481 763 aa17.4■□□□□ 0.38
VDAC3-212ENST00000524291 TRHP20396 242 aaPredicted RBP17.36■□□□□ 0.37
VDAC3-212ENST00000524291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.31■□□□□ 0.36
VDAC3-212ENST00000524291 HNRNPUL2Q1KMD3 747 aaKnown RBP17.31■□□□□ 0.36
VDAC3-212ENST00000524291 ZNF219Q9P2Y4 722 aaPredicted RBP17.31■□□□□ 0.36
VDAC3-212ENST00000524291 ABCB7O75027 752 aa17.25■□□□□ 0.35
VDAC3-212ENST00000524291 POTEHQ6S545 545 aa17.24■□□□□ 0.35
VDAC3-212ENST00000524291 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
VDAC3-212ENST00000524291 MYCNP04198 464 aaPredicted RBP16.94■□□□□ 0.3
VDAC3-212ENST00000524291 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
VDAC3-212ENST00000524291 POLA2Q14181 598 aa16.81■□□□□ 0.28
VDAC3-212ENST00000524291 SLC4A1APQ9BWU0 796 aaKnown RBP16.71■□□□□ 0.27
VDAC3-212ENST00000524291 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
VDAC3-212ENST00000524291 CHRDL2Q6WN34 429 aa16.55■□□□□ 0.24
VDAC3-212ENST00000524291 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.24
VDAC3-212ENST00000524291 ZBTB12Q9Y330 459 aaPredicted RBP16.48■□□□□ 0.23
VDAC3-212ENST00000524291 AKT1S1Q96B36 256 aa16.39■□□□□ 0.21
VDAC3-212ENST00000524291 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
VDAC3-212ENST00000524291 ZBTB22O15209 634 aa16.24■□□□□ 0.19
VDAC3-212ENST00000524291 REM2Q8IYK8 340 aaPredicted RBP16.22■□□□□ 0.19
VDAC3-212ENST00000524291 ATXN8OSP0DMR3 200 aa16.14■□□□□ 0.17
VDAC3-212ENST00000524291 PIP4P2Q8N4L2 257 aa16.09■□□□□ 0.17
VDAC3-212ENST00000524291 PITPNM1O00562 1244 aa16.05■□□□□ 0.16
VDAC3-212ENST00000524291 SP7Q8TDD2 431 aaPredicted RBP16.05■□□□□ 0.16
VDAC3-212ENST00000524291 FBLN2P98095 1184 aa15.98■□□□□ 0.15
VDAC3-212ENST00000524291 FXR2P51116 673 aaKnown RBP eCLIP15.95■□□□□ 0.14
VDAC3-212ENST00000524291 SPDYE2BA6NHP3 402 aa15.92■□□□□ 0.14
VDAC3-212ENST00000524291 HAX1O00165 279 aa15.92■□□□□ 0.14
VDAC3-212ENST00000524291 SPDYE6P0CI01 402 aa15.92■□□□□ 0.14
VDAC3-212ENST00000524291 SPDYE2Q495Y8 402 aa15.92■□□□□ 0.14
VDAC3-212ENST00000524291 MKRN4PQ13434 485 aaPredicted RBP15.74■□□□□ 0.11
VDAC3-212ENST00000524291 SPDYE1Q8NFV5 336 aaPredicted RBP15.73■□□□□ 0.11
VDAC3-212ENST00000524291 CLEC11AQ9Y240 323 aa15.73■□□□□ 0.11
VDAC3-212ENST00000524291 ZNF692Q9BU19 519 aaPredicted RBP15.72■□□□□ 0.11
VDAC3-212ENST00000524291 PRKAR2AP13861 404 aaKnown RBP15.66■□□□□ 0.1
VDAC3-212ENST00000524291 SSUH2Q9Y2M2 353 aa15.65■□□□□ 0.1
VDAC3-212ENST00000524291 EVX2Q03828 476 aa15.62■□□□□ 0.09
VDAC3-212ENST00000524291 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
VDAC3-212ENST00000524291 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
VDAC3-212ENST00000524291 PRR29P0C7W0 189 aa15.43■□□□□ 0.06
VDAC3-212ENST00000524291 CHADLQ6NUI6 762 aa15.42■□□□□ 0.06
VDAC3-212ENST00000524291 GABBR2O75899 941 aa15.29■□□□□ 0.04
VDAC3-212ENST00000524291 CSRNP3Q8WYN3 585 aa15.29■□□□□ 0.04
VDAC3-212ENST00000524291 CD44P16070 742 aaKnown RBP15.16■□□□□ 0.02
VDAC3-212ENST00000524291 FARP1Q9Y4F1 1045 aaPredicted RBP15.16■□□□□ 0.02
VDAC3-212ENST00000524291 LHX8Q68G74 356 aa15.06■□□□□ 0
VDAC3-212ENST00000524291 EHMT2Q96KQ7 1210 aa15.02■□□□□ -0
VDAC3-212ENST00000524291 STAG3Q9UJ98 1225 aa15.01□□□□□ -0.01
VDAC3-212ENST00000524291 CLCN6P51797 869 aa14.99□□□□□ -0.01
VDAC3-212ENST00000524291 SPDYE4A6NLX3 237 aa14.94□□□□□ -0.02
VDAC3-212ENST00000524291 POTEIP0CG38 1075 aa14.93□□□□□ -0.02
VDAC3-212ENST00000524291 CREBZFQ9NS37 354 aa14.93□□□□□ -0.02
VDAC3-212ENST00000524291 ZRANB1Q9UGI0 708 aa14.91□□□□□ -0.02
VDAC3-212ENST00000524291 ZNF579Q8NAF0 562 aaKnown RBP14.88□□□□□ -0.03
VDAC3-212ENST00000524291 DCBLD2Q96PD2 775 aa14.88□□□□□ -0.03
VDAC3-212ENST00000524291 PAK3O75914 559 aaPredicted RBP14.78□□□□□ -0.04
VDAC3-212ENST00000524291 NPM1P06748 294 aaKnown RBP eCLIP14.72□□□□□ -0.05
VDAC3-212ENST00000524291 GALR2O43603 387 aaPredicted RBP14.71□□□□□ -0.05
VDAC3-212ENST00000524291 PHF12Q96QT6 1004 aa14.66□□□□□ -0.06
VDAC3-212ENST00000524291 MNX1P50219 401 aaPredicted RBP14.61□□□□□ -0.07
VDAC3-212ENST00000524291 PROM2Q8N271 834 aa14.46□□□□□ -0.09
VDAC3-212ENST00000524291 MS4A3Q96HJ5 214 aa14.46□□□□□ -0.09
VDAC3-212ENST00000524291 OTUD5Q96G74 571 aa14.44□□□□□ -0.1
VDAC3-212ENST00000524291 TSPYL2Q9H2G4 693 aaPredicted RBP14.44□□□□□ -0.1
VDAC3-212ENST00000524291 POTEB2H3BUK9 544 aa14.43□□□□□ -0.1
VDAC3-212ENST00000524291 PELP1Q8IZL8 1130 aaKnown RBP14.43□□□□□ -0.1
VDAC3-212ENST00000524291 ASTLQ6HA08 431 aaPredicted RBP14.38□□□□□ -0.11
VDAC3-212ENST00000524291 ATMINO43313 823 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms