Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SPTSSB-204ENST00000617024 1292 ntBASIC15.08■□□□□ 0
COL21A1Q96P44 AC084121.4-201ENST00000641598 221 ntBASIC15.08■□□□□ 0
COL21A1Q96P44 AF228730.8-201ENST00000642140 221 ntBASIC15.08■□□□□ 0
COL21A1Q96P44 PPT1-215ENST00000641471 2368 ntBASIC15.08■□□□□ 0
COL21A1Q96P44 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.08■□□□□ 0
COL21A1Q96P44 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.08■□□□□ 0
COL21A1Q96P44 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
COL21A1Q96P44 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
COL21A1Q96P44 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
COL21A1Q96P44 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL21A1Q96P44 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
COL21A1Q96P44 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.07■□□□□ 0
COL21A1Q96P44 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.07■□□□□ 0
COL21A1Q96P44 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
COL21A1Q96P44 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
COL21A1Q96P44 AC023157.3-201ENST00000619086 2088 ntBASIC15.07■□□□□ 0
COL21A1Q96P44 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.07■□□□□ 0
COL21A1Q96P44 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
COL21A1Q96P44 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
COL21A1Q96P44 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.07■□□□□ 0
COL21A1Q96P44 AC142381.1-201ENST00000426099 345 ntBASIC15.07■□□□□ 0
COL21A1Q96P44 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.07■□□□□ 0
COL21A1Q96P44 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
COL21A1Q96P44 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.07■□□□□ 0
COL21A1Q96P44 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.07■□□□□ 0
COL21A1Q96P44 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.07■□□□□ 0
COL21A1Q96P44 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.07■□□□□ 0
COL21A1Q96P44 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.07■□□□□ 0
COL21A1Q96P44 AP002414.2-201ENST00000591780 3365 ntBASIC15.07■□□□□ 0
COL21A1Q96P44 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
COL21A1Q96P44 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.07■□□□□ 0
COL21A1Q96P44 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.07■□□□□ 0
COL21A1Q96P44 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 AL589702.1-201ENST00000641229 1509 ntBASIC15.07■□□□□ 0
COL21A1Q96P44 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
COL21A1Q96P44 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.07■□□□□ 0
COL21A1Q96P44 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.07■□□□□ 0
COL21A1Q96P44 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.07■□□□□ 0
COL21A1Q96P44 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.06■□□□□ 0
COL21A1Q96P44 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
COL21A1Q96P44 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
COL21A1Q96P44 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
COL21A1Q96P44 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.06■□□□□ 0
COL21A1Q96P44 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.06■□□□□ 0
COL21A1Q96P44 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
COL21A1Q96P44 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.06■□□□□ 0
COL21A1Q96P44 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.06■□□□□ 0
COL21A1Q96P44 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 SLC25A39P2-201ENST00000537614 270 ntBASIC15.06■□□□□ 0
COL21A1Q96P44 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.06■□□□□ 0
COL21A1Q96P44 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
COL21A1Q96P44 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.06■□□□□ 0
COL21A1Q96P44 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
COL21A1Q96P44 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
COL21A1Q96P44 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.06■□□□□ 0
COL21A1Q96P44 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
COL21A1Q96P44 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms