Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 MIR661-201ENST00000384842 89 ntBASIC14.41□□□□□ -0.1
LRRC46Q96FV0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 RN7SL692P-201ENST00000464677 288 ntBASIC14.41□□□□□ -0.1
LRRC46Q96FV0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 AC105021.1-202ENST00000570572 669 ntBASIC14.41□□□□□ -0.1
LRRC46Q96FV0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 AC025048.6-201ENST00000634326 1161 ntBASIC14.41□□□□□ -0.1
LRRC46Q96FV0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.41□□□□□ -0.1
LRRC46Q96FV0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 AL391825.1-201ENST00000457671 1364 ntBASIC14.4□□□□□ -0.1
LRRC46Q96FV0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 TSSK5P-201ENST00000423978 907 ntBASIC14.4□□□□□ -0.1
LRRC46Q96FV0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 AL353779.1-201ENST00000434793 351 ntBASIC14.4□□□□□ -0.1
LRRC46Q96FV0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 RN7SL618P-201ENST00000477850 296 ntBASIC14.4□□□□□ -0.1
LRRC46Q96FV0 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 SPDYE22P-201ENST00000582158 798 ntBASIC14.4□□□□□ -0.1
LRRC46Q96FV0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 TEX28P1-201ENST00000613479 1221 ntBASIC14.4□□□□□ -0.1
LRRC46Q96FV0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 TEX28P2-201ENST00000617764 1221 ntBASIC14.4□□□□□ -0.1
LRRC46Q96FV0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 CU639417.3-201ENST00000624240 1404 ntBASIC14.4□□□□□ -0.1
LRRC46Q96FV0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LRRC46Q96FV0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
LRRC46Q96FV0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.4□□□□□ -0.11
LRRC46Q96FV0 AC126755.1-201ENST00000525846 6405 ntBASIC14.4□□□□□ -0.11
LRRC46Q96FV0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.4□□□□□ -0.11
LRRC46Q96FV0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRRC46Q96FV0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRC46Q96FV0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC46Q96FV0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.39□□□□□ -0.11
LRRC46Q96FV0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
LRRC46Q96FV0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.39□□□□□ -0.11
LRRC46Q96FV0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRRC46Q96FV0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms