Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.66■□□□□ 0.26
SHKBP1Q8TBC3 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 AC074338.1-201ENST00000416825 156 ntBASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 AC104596.2-201ENST00000512793 793 ntBASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 AC092552.1-201ENST00000547243 906 ntBASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 AL033527.5-201ENST00000641382 801 ntBASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SHKBP1Q8TBC3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SHKBP1Q8TBC3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
SHKBP1Q8TBC3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 TARDBPP1-201ENST00000442013 1203 ntBASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 AC007389.4-201ENST00000454674 793 ntBASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 RN7SL399P-201ENST00000471648 279 ntBASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 AL158212.4-201ENST00000624062 1286 ntBASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHKBP1Q8TBC3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 ALOX12P2-203ENST00000570921 1945 ntBASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.63■□□□□ 0.25
SHKBP1Q8TBC3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms