Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 AL671277.1-201ENST00000429656 993 ntBASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 HTR5BP-201ENST00000430851 1154 ntBASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 KRT18P34-201ENST00000488218 1270 ntBASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 AC020765.3-201ENST00000613051 740 ntBASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 AC092902.6-201ENST00000641783 218 ntBASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CFAP61Q8NHU2 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 AC005829.1-201ENST00000570002 483 ntBASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 AC099522.2-201ENST00000607001 744 ntBASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CFAP61Q8NHU2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 CEND1P1-201ENST00000451006 455 ntBASIC16.16■□□□□ 0.18
CFAP61Q8NHU2 AC112482.1-201ENST00000492080 688 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms