Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIML2Q8N7C3 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.46■□□□□ 0.07
TRIML2Q8N7C3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRIML2Q8N7C3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIML2Q8N7C3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIML2Q8N7C3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIML2Q8N7C3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIML2Q8N7C3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.06
TRIML2Q8N7C3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
TRIML2Q8N7C3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.46■□□□□ 0.06
TRIML2Q8N7C3 AC069224.1-201ENST00000566372 1715 ntBASIC15.46■□□□□ 0.06
TRIML2Q8N7C3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIML2Q8N7C3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 SSR4P1-203ENST00000599569 2260 ntBASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 AC112504.1-201ENST00000623415 1841 ntBASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRIML2Q8N7C3 PTENP1-202ENST00000532280 3996 ntBASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 CRYGEP-201ENST00000412192 528 ntBASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 VN2R19P-201ENST00000442399 1052 ntBASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
TRIML2Q8N7C3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRIML2Q8N7C3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIML2Q8N7C3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIML2Q8N7C3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIML2Q8N7C3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIML2Q8N7C3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIML2Q8N7C3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIML2Q8N7C3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIML2Q8N7C3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms