Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 FLJ16779-201ENST00000612722 7638 ntBASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 AC004790.2-201ENST00000623588 572 ntBASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
EFCAB3Q8N7B9 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 TOP3BP1-201ENST00000420768 1380 ntBASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 ELL2P1-201ENST00000413990 1906 ntBASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
EFCAB3Q8N7B9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 MTCO1P15-201ENST00000529569 1526 ntBASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
EFCAB3Q8N7B9 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
EFCAB3Q8N7B9 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
EFCAB3Q8N7B9 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.01■□□□□ 0.15
EFCAB3Q8N7B9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
EFCAB3Q8N7B9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.01■□□□□ 0.15
EFCAB3Q8N7B9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
EFCAB3Q8N7B9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
EFCAB3Q8N7B9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms