Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 KRT8P12-202ENST00000472924 1397 ntBASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 AL162727.3-201ENST00000635661 2787 ntBASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11FIP4Q86YS3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 SPDYE17-201ENST00000412399 783 ntBASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 CYMP-203ENST00000474680 1263 ntBASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 HNRNPUP1-201ENST00000554987 333 ntBASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 AL450472.2-201ENST00000603663 1156 ntBASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11FIP4Q86YS3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 EEF1DP4-201ENST00000446006 880 ntBASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 PHKG1P2-201ENST00000457537 863 ntBASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 AC067863.1-201ENST00000494933 530 ntBASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 AC100757.3-201ENST00000622361 1406 ntBASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 AL607033.1-201ENST00000623900 1599 ntBASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.62■□□□□ 0.57
RAB11FIP4Q86YS3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB11FIP4Q86YS3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB11FIP4Q86YS3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms