Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 AC025048.3-201ENST00000590609 569 ntBASIC16.9■□□□□ 0.3
VSTM1Q6UX27 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 AC005702.4-201ENST00000618393 416 ntBASIC16.9■□□□□ 0.3
VSTM1Q6UX27 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VSTM1Q6UX27 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
VSTM1Q6UX27 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
VSTM1Q6UX27 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 AL136379.1-201ENST00000623471 2642 ntBASIC16.89■□□□□ 0.29
VSTM1Q6UX27 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 AC074044.1-201ENST00000609673 707 ntBASIC16.89■□□□□ 0.29
VSTM1Q6UX27 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 AL109936.8-201ENST00000641772 604 ntBASIC16.89■□□□□ 0.29
VSTM1Q6UX27 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 AP005117.1-202ENST00000581724 1908 ntBASIC16.89■□□□□ 0.29
VSTM1Q6UX27 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VSTM1Q6UX27 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 AC022532.1-201ENST00000624563 1728 ntBASIC16.88■□□□□ 0.29
VSTM1Q6UX27 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 AC104794.3-201ENST00000566840 1248 ntBASIC16.88■□□□□ 0.29
VSTM1Q6UX27 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VSTM1Q6UX27 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms