Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.67■□□□□ 0.26
FOXR1Q6PIV2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 PRSS29P-201ENST00000440800 595 ntBASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 LINC00895-201ENST00000629028 1637 ntBASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
FOXR1Q6PIV2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 MKNK2P1-201ENST00000437526 628 ntBASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 IGHV3-52-201ENST00000519770 353 ntBASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 AC092364.2-202ENST00000597012 1073 ntBASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 AC010654.1-201ENST00000615722 808 ntBASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 AC010507.1-201ENST00000633895 436 ntBASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
FOXR1Q6PIV2 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms