Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC10.56□□□□□ -0.72
SYCNQ0VAF6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 MIR574-201ENST00000385209 96 ntBASIC10.56□□□□□ -0.72
SYCNQ0VAF6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 AC004832.2-201ENST00000426397 482 ntBASIC10.56□□□□□ -0.72
SYCNQ0VAF6 GPX1P2-201ENST00000429271 606 ntBASIC10.56□□□□□ -0.72
SYCNQ0VAF6 MKNK2P1-201ENST00000437526 628 ntBASIC10.56□□□□□ -0.72
SYCNQ0VAF6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 TIMM8BP1-201ENST00000452384 211 ntBASIC10.56□□□□□ -0.72
SYCNQ0VAF6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SYCNQ0VAF6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 HLA-DQB2-231ENST00000435145 2026 ntBASIC10.55□□□□□ -0.72
SYCNQ0VAF6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 UXT-AS1-201ENST00000590504 1525 ntBASIC10.55□□□□□ -0.72
SYCNQ0VAF6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 HLA-H-201ENST00000383620 1096 ntBASIC10.55□□□□□ -0.72
SYCNQ0VAF6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 AC079140.1-201ENST00000508039 487 ntBASIC10.55□□□□□ -0.72
SYCNQ0VAF6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 AC026979.3-201ENST00000607315 403 ntBASIC10.55□□□□□ -0.72
SYCNQ0VAF6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SYCNQ0VAF6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms