Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM4P67936 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TPM4P67936 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.87■□□□□ 0.45
TPM4P67936 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM4P67936 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TPM4P67936 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM4P67936 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.87■□□□□ 0.45
TPM4P67936 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.87■□□□□ 0.45
TPM4P67936 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.87■□□□□ 0.45
TPM4P67936 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TPM4P67936 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.87■□□□□ 0.45
TPM4P67936 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TPM4P67936 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.87■□□□□ 0.45
TPM4P67936 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM4P67936 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TPM4P67936 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM4P67936 WASH6P-202ENST00000359512 1437 ntBASIC17.87■□□□□ 0.45
TPM4P67936 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TPM4P67936 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.87■□□□□ 0.45
TPM4P67936 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM4P67936 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.87■□□□□ 0.45
TPM4P67936 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TPM4P67936 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TPM4P67936 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM4P67936 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM4P67936 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.86■□□□□ 0.45
TPM4P67936 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM4P67936 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM4P67936 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM4P67936 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM4P67936 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM4P67936 C18orf15-201ENST00000623680 2534 ntBASIC17.86■□□□□ 0.45
TPM4P67936 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TPM4P67936 FAM210CP-201ENST00000445714 574 ntBASIC17.86■□□□□ 0.45
TPM4P67936 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM4P67936 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.86■□□□□ 0.45
TPM4P67936 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TPM4P67936 OR7E47P-204ENST00000575924 449 ntBASIC17.86■□□□□ 0.45
TPM4P67936 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.86■□□□□ 0.45
TPM4P67936 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM4P67936 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TPM4P67936 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM4P67936 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TPM4P67936 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM4P67936 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM4P67936 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM4P67936 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM4P67936 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM4P67936 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.86■□□□□ 0.45
TPM4P67936 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TPM4P67936 AC134407.2-201ENST00000625089 1978 ntBASIC17.86■□□□□ 0.45
TPM4P67936 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.86■□□□□ 0.45
TPM4P67936 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.86■□□□□ 0.45
TPM4P67936 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TPM4P67936 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.85■□□□□ 0.45
TPM4P67936 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 AKR1C7P-201ENST00000305623 895 ntBASIC17.85■□□□□ 0.45
TPM4P67936 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TPM4P67936 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.85■□□□□ 0.45
TPM4P67936 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.85■□□□□ 0.45
TPM4P67936 AC026396.1-201ENST00000419388 421 ntBASIC17.85■□□□□ 0.45
TPM4P67936 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TPM4P67936 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.85■□□□□ 0.45
TPM4P67936 PMS2P7-201ENST00000506558 1336 ntBASIC17.85■□□□□ 0.45
TPM4P67936 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.85■□□□□ 0.45
TPM4P67936 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
TPM4P67936 AF238378.1-201ENST00000526806 358 ntBASIC17.85■□□□□ 0.45
TPM4P67936 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.85■□□□□ 0.45
TPM4P67936 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.85■□□□□ 0.45
TPM4P67936 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 AC007292.2-201ENST00000593524 1812 ntBASIC17.85■□□□□ 0.45
TPM4P67936 AL589702.1-201ENST00000641229 1509 ntBASIC17.85■□□□□ 0.45
TPM4P67936 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.85■□□□□ 0.45
TPM4P67936 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.85■□□□□ 0.45
TPM4P67936 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.85■□□□□ 0.45
TPM4P67936 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TPM4P67936 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.84■□□□□ 0.45
TPM4P67936 AC112693.3-201ENST00000624819 1983 ntBASIC17.84■□□□□ 0.45
TPM4P67936 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TPM4P67936 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms