Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.02□□□□□ -0.33
CEACAM3P40198 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
CEACAM3P40198 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CEACAM3P40198 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 PCDH8P1-201ENST00000428983 2773 ntBASIC13.02□□□□□ -0.33
CEACAM3P40198 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.02□□□□□ -0.33
CEACAM3P40198 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CEACAM3P40198 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CEACAM3P40198 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.01□□□□□ -0.33
CEACAM3P40198 MYO15B-237ENST00000642007 4893 ntBASIC13.01□□□□□ -0.33
CEACAM3P40198 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CEACAM3P40198 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CEACAM3P40198 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CEACAM3P40198 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CEACAM3P40198 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CEACAM3P40198 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.01□□□□□ -0.33
CEACAM3P40198 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC13.01□□□□□ -0.33
CEACAM3P40198 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.01□□□□□ -0.33
CEACAM3P40198 FO393414.2-201ENST00000405153 598 ntBASIC13.01□□□□□ -0.33
CEACAM3P40198 PMS2P2-201ENST00000425039 1128 ntBASIC13.01□□□□□ -0.33
CEACAM3P40198 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.01□□□□□ -0.33
CEACAM3P40198 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.01□□□□□ -0.33
CEACAM3P40198 HLA-V-204ENST00000476601 1289 ntBASIC13.01□□□□□ -0.33
CEACAM3P40198 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.01□□□□□ -0.33
CEACAM3P40198 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.01□□□□□ -0.33
CEACAM3P40198 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.01□□□□□ -0.33
CEACAM3P40198 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.01□□□□□ -0.33
CEACAM3P40198 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.01□□□□□ -0.33
CEACAM3P40198 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.01□□□□□ -0.33
CEACAM3P40198 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.01□□□□□ -0.33
CEACAM3P40198 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.01□□□□□ -0.33
CEACAM3P40198 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.01□□□□□ -0.33
CEACAM3P40198 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.01□□□□□ -0.33
CEACAM3P40198 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.01□□□□□ -0.33
CEACAM3P40198 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.01□□□□□ -0.33
CEACAM3P40198 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CEACAM3P40198 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 KRT8P37-201ENST00000451609 1420 ntBASIC13.01□□□□□ -0.33
CEACAM3P40198 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 AC069224.1-201ENST00000566372 1715 ntBASIC13.01□□□□□ -0.33
CEACAM3P40198 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
CEACAM3P40198 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 LINC02447-202ENST00000501888 2146 ntBASIC13.01□□□□□ -0.33
CEACAM3P40198 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.01□□□□□ -0.33
CEACAM3P40198 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
CEACAM3P40198 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.01□□□□□ -0.33
CEACAM3P40198 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
CEACAM3P40198 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CEACAM3P40198 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CEACAM3P40198 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CEACAM3P40198 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13□□□□□ -0.33
CEACAM3P40198 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13□□□□□ -0.33
CEACAM3P40198 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 AC026691.1-201ENST00000602502 2017 ntBASIC13□□□□□ -0.33
CEACAM3P40198 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CEACAM3P40198 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CEACAM3P40198 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms