Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.66■□□□□ 0.58
TOP1P11387 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.66■□□□□ 0.58
TOP1P11387 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TOP1P11387 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TOP1P11387 Z97205.2-201ENST00000564697 1639 ntBASIC18.66■□□□□ 0.58
TOP1P11387 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TOP1P11387 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP1P11387 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP1P11387 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.66■□□□□ 0.58
TOP1P11387 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TOP1P11387 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP1P11387 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TOP1P11387 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TOP1P11387 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.65■□□□□ 0.58
TOP1P11387 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.65■□□□□ 0.58
TOP1P11387 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TOP1P11387 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TOP1P11387 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 PIN1P1-201ENST00000412108 996 ntBASIC18.65■□□□□ 0.58
TOP1P11387 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.65■□□□□ 0.58
TOP1P11387 PHKG1P2-201ENST00000457537 863 ntBASIC18.65■□□□□ 0.58
TOP1P11387 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.65■□□□□ 0.58
TOP1P11387 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TOP1P11387 SRD5A3P1-201ENST00000603021 949 ntBASIC18.65■□□□□ 0.58
TOP1P11387 AC004790.1-201ENST00000612686 536 ntBASIC18.65■□□□□ 0.58
TOP1P11387 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TOP1P11387 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.65■□□□□ 0.58
TOP1P11387 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TOP1P11387 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.65■□□□□ 0.58
TOP1P11387 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TOP1P11387 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TOP1P11387 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.65■□□□□ 0.58
TOP1P11387 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.65■□□□□ 0.58
TOP1P11387 AC024909.3-201ENST00000611513 2257 ntBASIC18.65■□□□□ 0.58
TOP1P11387 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TOP1P11387 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TOP1P11387 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.64■□□□□ 0.58
TOP1P11387 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TOP1P11387 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
TOP1P11387 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.64■□□□□ 0.58
TOP1P11387 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC18.64■□□□□ 0.57
TOP1P11387 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.64■□□□□ 0.57
TOP1P11387 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TOP1P11387 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.64■□□□□ 0.57
TOP1P11387 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.64■□□□□ 0.57
TOP1P11387 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.64■□□□□ 0.57
TOP1P11387 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.64■□□□□ 0.57
TOP1P11387 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.64■□□□□ 0.57
TOP1P11387 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.64■□□□□ 0.57
TOP1P11387 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 GNAQP1-201ENST00000444815 1067 ntBASIC18.64■□□□□ 0.57
TOP1P11387 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.64■□□□□ 0.57
TOP1P11387 COX20P2-201ENST00000452636 358 ntBASIC18.64■□□□□ 0.57
TOP1P11387 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.64■□□□□ 0.57
TOP1P11387 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.64■□□□□ 0.57
TOP1P11387 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.64■□□□□ 0.57
TOP1P11387 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.64■□□□□ 0.57
TOP1P11387 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.64■□□□□ 0.57
TOP1P11387 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.64■□□□□ 0.57
TOP1P11387 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.64■□□□□ 0.57
TOP1P11387 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.64■□□□□ 0.57
TOP1P11387 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TOP1P11387 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.64■□□□□ 0.57
TOP1P11387 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TOP1P11387 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TOP1P11387 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms