Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C4BPAP04003 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C4BPAP04003 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
C4BPAP04003 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
C4BPAP04003 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C4BPAP04003 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
C4BPAP04003 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.97■□□□□ 0.31
C4BPAP04003 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
C4BPAP04003 CROCCP1-201ENST00000426910 5675 ntBASIC16.96■□□□□ 0.31
C4BPAP04003 SSR4P1-203ENST00000599569 2260 ntBASIC16.96■□□□□ 0.31
C4BPAP04003 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.96■□□□□ 0.31
C4BPAP04003 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.96■□□□□ 0.31
C4BPAP04003 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C4BPAP04003 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C4BPAP04003 AC136621.1-201ENST00000624017 2304 ntBASIC16.96■□□□□ 0.31
C4BPAP04003 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C4BPAP04003 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
C4BPAP04003 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C4BPAP04003 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C4BPAP04003 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
C4BPAP04003 MIR661-201ENST00000384842 89 ntBASIC16.96■□□□□ 0.31
C4BPAP04003 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.96■□□□□ 0.31
C4BPAP04003 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.96■□□□□ 0.31
C4BPAP04003 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C4BPAP04003 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C4BPAP04003 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.96■□□□□ 0.31
C4BPAP04003 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
C4BPAP04003 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.96■□□□□ 0.31
C4BPAP04003 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.96■□□□□ 0.31
C4BPAP04003 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.96■□□□□ 0.31
C4BPAP04003 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.96■□□□□ 0.31
C4BPAP04003 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.96■□□□□ 0.31
C4BPAP04003 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
C4BPAP04003 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
C4BPAP04003 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C4BPAP04003 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C4BPAP04003 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
C4BPAP04003 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.96■□□□□ 0.31
C4BPAP04003 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
C4BPAP04003 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.96■□□□□ 0.3
C4BPAP04003 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.96■□□□□ 0.3
C4BPAP04003 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
C4BPAP04003 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
C4BPAP04003 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
C4BPAP04003 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
C4BPAP04003 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
C4BPAP04003 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
C4BPAP04003 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
C4BPAP04003 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
C4BPAP04003 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 HMGN1P19-201ENST00000436976 333 ntBASIC16.95■□□□□ 0.3
C4BPAP04003 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.95■□□□□ 0.3
C4BPAP04003 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.95■□□□□ 0.3
C4BPAP04003 TIMM17BP1-201ENST00000545713 516 ntBASIC16.95■□□□□ 0.3
C4BPAP04003 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.95■□□□□ 0.3
C4BPAP04003 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.95■□□□□ 0.3
C4BPAP04003 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.95■□□□□ 0.3
C4BPAP04003 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.95■□□□□ 0.3
C4BPAP04003 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
C4BPAP04003 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C4BPAP04003 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C4BPAP04003 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
C4BPAP04003 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.94■□□□□ 0.3
C4BPAP04003 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C4BPAP04003 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
C4BPAP04003 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
C4BPAP04003 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.94■□□□□ 0.3
C4BPAP04003 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
C4BPAP04003 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C4BPAP04003 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C4BPAP04003 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.94■□□□□ 0.3
C4BPAP04003 TSPY16P-201ENST00000449843 468 ntBASIC16.94■□□□□ 0.3
C4BPAP04003 MEIS3P1-201ENST00000495167 958 ntBASIC16.94■□□□□ 0.3
C4BPAP04003 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.94■□□□□ 0.3
C4BPAP04003 AC104794.3-201ENST00000566840 1248 ntBASIC16.94■□□□□ 0.3
C4BPAP04003 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.94■□□□□ 0.3
C4BPAP04003 AL391069.4-201ENST00000609583 481 ntBASIC16.94■□□□□ 0.3
C4BPAP04003 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
C4BPAP04003 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C4BPAP04003 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.94■□□□□ 0.3
C4BPAP04003 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
C4BPAP04003 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C4BPAP04003 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms