Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CICP20-201ENST00000443330 2801 ntBASIC14.25□□□□□ -0.13
APOA1P02647 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.25□□□□□ -0.13
APOA1P02647 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
APOA1P02647 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
APOA1P02647 AC148477.4-201ENST00000613430 1793 ntBASIC14.25□□□□□ -0.13
APOA1P02647 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.25□□□□□ -0.13
APOA1P02647 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.25□□□□□ -0.13
APOA1P02647 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
APOA1P02647 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.25□□□□□ -0.13
APOA1P02647 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.25□□□□□ -0.13
APOA1P02647 MPDU1-223ENST00000582151 728 ntBASIC14.25□□□□□ -0.13
APOA1P02647 AC090616.6-201ENST00000582640 721 ntBASIC14.25□□□□□ -0.13
APOA1P02647 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.25□□□□□ -0.13
APOA1P02647 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.25□□□□□ -0.13
APOA1P02647 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
APOA1P02647 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
APOA1P02647 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.25□□□□□ -0.13
APOA1P02647 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
APOA1P02647 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.25□□□□□ -0.13
APOA1P02647 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOA1P02647 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA1P02647 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APOA1P02647 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
APOA1P02647 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA1P02647 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 REXO1L1P-202ENST00000608646 1974 ntBASIC14.24□□□□□ -0.13
APOA1P02647 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
APOA1P02647 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APOA1P02647 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APOA1P02647 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 LIN28AP1-201ENST00000429574 405 ntBASIC14.24□□□□□ -0.13
APOA1P02647 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
APOA1P02647 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA1P02647 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA1P02647 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.24□□□□□ -0.13
APOA1P02647 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA1P02647 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.24□□□□□ -0.13
APOA1P02647 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
APOA1P02647 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 AC008677.1-201ENST00000519230 1561 ntBASIC14.24□□□□□ -0.13
APOA1P02647 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
APOA1P02647 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA1P02647 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA1P02647 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA1P02647 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA1P02647 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA1P02647 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOA1P02647 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APOA1P02647 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
APOA1P02647 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.24□□□□□ -0.13
APOA1P02647 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.24□□□□□ -0.13
APOA1P02647 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.23□□□□□ -0.13
APOA1P02647 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
APOA1P02647 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.23□□□□□ -0.13
APOA1P02647 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APOA1P02647 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
APOA1P02647 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOA1P02647 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
APOA1P02647 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms