Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.31■□□□□ 0.2
MT-CO1P00395 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
MT-CO1P00395 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.31■□□□□ 0.2
MT-CO1P00395 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.31■□□□□ 0.2
MT-CO1P00395 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.31■□□□□ 0.2
MT-CO1P00395 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.31■□□□□ 0.2
MT-CO1P00395 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.31■□□□□ 0.2
MT-CO1P00395 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MT-CO1P00395 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.31■□□□□ 0.2
MT-CO1P00395 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
MT-CO1P00395 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.31■□□□□ 0.2
MT-CO1P00395 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.31■□□□□ 0.2
MT-CO1P00395 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MT-CO1P00395 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
MT-CO1P00395 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.31■□□□□ 0.2
MT-CO1P00395 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.3■□□□□ 0.2
MT-CO1P00395 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-CO1P00395 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-CO1P00395 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MT-CO1P00395 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-CO1P00395 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MT-CO1P00395 FAM207CP-201ENST00000443486 507 ntBASIC16.3■□□□□ 0.2
MT-CO1P00395 SERBP1P3-201ENST00000459980 809 ntBASIC16.3■□□□□ 0.2
MT-CO1P00395 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.3■□□□□ 0.2
MT-CO1P00395 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MT-CO1P00395 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.3■□□□□ 0.2
MT-CO1P00395 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.3■□□□□ 0.2
MT-CO1P00395 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MT-CO1P00395 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.3■□□□□ 0.2
MT-CO1P00395 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MT-CO1P00395 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.29■□□□□ 0.2
MT-CO1P00395 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.29■□□□□ 0.2
MT-CO1P00395 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MT-CO1P00395 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 KRT8P37-201ENST00000451609 1420 ntBASIC16.29■□□□□ 0.2
MT-CO1P00395 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-CO1P00395 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MT-CO1P00395 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
MT-CO1P00395 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
MT-CO1P00395 AL596257.1-201ENST00000641463 2694 ntBASIC16.29■□□□□ 0.2
MT-CO1P00395 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MT-CO1P00395 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.29■□□□□ 0.2
MT-CO1P00395 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
MT-CO1P00395 AC011270.2-201ENST00000624293 2550 ntBASIC16.29■□□□□ 0.2
MT-CO1P00395 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
MT-CO1P00395 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MT-CO1P00395 AZGP1P1-201ENST00000411909 902 ntBASIC16.29■□□□□ 0.2
MT-CO1P00395 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.29■□□□□ 0.2
MT-CO1P00395 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.29■□□□□ 0.2
MT-CO1P00395 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MT-CO1P00395 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.29■□□□□ 0.2
MT-CO1P00395 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-CO1P00395 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-CO1P00395 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.29■□□□□ 0.2
MT-CO1P00395 ZNF890P-202ENST00000530367 1156 ntBASIC16.29■□□□□ 0.2
MT-CO1P00395 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.29■□□□□ 0.2
MT-CO1P00395 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.29■□□□□ 0.2
MT-CO1P00395 MIR6069-201ENST00000620069 79 ntBASIC16.29■□□□□ 0.2
MT-CO1P00395 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms